YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: COBT_ECOLI

General Information:
Name(s) found: COBT_ECOLI [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • pir||F64963 nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) - Escherichia coli (strain K-12) [NCBI NR]
  • gi|2506993|sp|P36562.3|COBT_ECOLI RecName: Full=Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase; Short=NN:DBI PRT; AltName: Full=N(1)-alpha-phosphoribosyltransferase [NCBI NR]
  • gi|1736652|dbj|BAA15808.1| nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase [Escherichia coli W3110] [NCBI NR]
  • Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (EC 2.4.2.21) (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase) - Escherichia coli [Swiss-Prot]
  • nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase [Escherichia coli K12]gi|1788300|gb|AAC75052.1| nicotinate-nucleotide dimethylbenzimidazole-P phophoribosyl transferase [Escherichia coli K12]gi|7466661|pir||F64963 nicotinate-nucle [nrdb_11152004_Chlamydomonas]
  • Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase (NN:DBI PRT) (N(1)-alpha-phosphoribosyltransferase) [NCBI-RefSeq_human_na_08-09-2006_reversed.fasta]
  • Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase OS=Escherichia coli (strain K12) GN=cobT PE=3 SV=3 [uniprot-Ecoli-reviewed-110511.fasta]
    • Organism: Escherichia coli
    Length: 359 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQILADLLNT IPAIDSTAMS RAQRHIDGLL KPVGSLGKLE VLAIQLAGMP GLNGIPHVGK  60
   61 KAVLVMCADH GVWEEGVAIS PKEVTAIQAE NMTRGTTGVC VLAEQAGANV HVIDVGIDTA 120
  121 EPIPGLINMR VARGSGNIAS APAMSRRQAE KLLLDVICYT QELAKNGVTL FGVGELGMAN 180
  181 TTPAAAIVST ITGRDPEEVV GIGANLPTDK LANKIDVVRR AITLNQPNPQ DGVDVLAKVG 240
  241 GFDLVGIAGV MLGAASCGLP VLLDGFLSYA AALAACQMSP AIKPYLIPSH LSAEKGARIA 300
  301 LSHLGLEPYL NMEMRLGEGS GAALAMPIIE AACAIYNNMG ELAASNIVLP GNTTSDLNS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..359] PSI-BLAST 101.0 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
    		•  6.11307440325985 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.4037591171855 bayes_pls_golite062009
  • catalytic activity
    		•  2.05174935916901 bayes_pls_golite062009
  • transferase activity
    		•  1.06150708725398 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.819573960721987 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle