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Protein Overview: BIOD_ECOLI

General Information:
Name(s) found: BIOD_ECOLI [Swiss-Prot]
Description(s) found:
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  • gi|5542146|pdb|1BYI| Chain , Structure Of Apo-Dethiobiotin Synthase At 0.97 Angstroms Resolution [NCBI NR]
  • gi|5107421|pdb|1A82| Chain , Dethiobiotin Synthetase From Escherichia Coli, Complex With Substrates Atp And Diaminopelargonic Acid [NCBI NR]
  • gi|4699532|pdb|1DAK|A Chain A, Dethiobiotin Synthetase From Escherichia Coli, Complex Reaction Intermediate Adp And Mixed Anhydride [NCBI NR]
  • gi|4389237|pdb|1BS1|A Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp , Inorganic Phosphate And Magnesium [NCBI NR]
  • gi|4389215|pdb|1DAM|A Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp, Inorganic Phosphate And Magnesium [NCBI NR]
  • gi|1633424|pdb|1DAD| Chain , Dethiobiotin Synthetase Complexed With Adp [NCBI NR]
  • gi|1633423|pdb|1DAE| Chain , Dethiobiotin Synthetase Complexed With 3-(1-Aminoethyl) Nonanedioic Acid [NCBI NR]
  • gi|1633422|pdb|1DAF| Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid, Adp, And Calcium [NCBI NR]
  • gi|1633421|pdb|1DAG| Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid And 5'-Adenosyl-Methylene-Triphosphate [NCBI NR]
  • gi|1633420|pdb|1DAH| Chain , Dethiobiotin Synthetase Complexed With 7,8-Diamino-Nonanoic Acid, 5'-Adenosyl-Methylene-Triphosphate, And Manganese [NCBI NR]
  • gi|1633419|pdb|1DAI| Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid [NCBI NR]
  • gi|157830799|pdb|1DBS|A Chain A, Mechanistic Implications And Family Relationships From The Structure Of Dethiobiotin Synthetase [NCBI NR]
  • gi|157830793|pdb|1DAI|A Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8- Amino-Nonanoic Acid [NCBI NR]
  • gi|157830792|pdb|1DAH|A Chain A, Dethiobiotin Synthetase Complexed With 7,8-Diamino-Nonanoic Acid, 5'-Adenosyl-Methylene-Triphosphate, And Manganese [NCBI NR]
  • gi|157830791|pdb|1DAG|A Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8- Amino-Nonanoic Acid And 5'-Adenosyl-Methylene-Triphosphate [NCBI NR]
  • gi|157830790|pdb|1DAF|A Chain A, Dethiobiotin Synthetase Complexed With 7-(Carboxyamino)-8- Amino-Nonanoic Acid, Adp, And Calcium [NCBI NR]
  • gi|157830789|pdb|1DAE|A Chain A, Dethiobiotin Synthetase Complexed With 3-(1-Aminoethyl) Nonanedioic Acid [NCBI NR]
  • gi|157830788|pdb|1DAD|A Chain A, Dethiobiotin Synthetase Complexed With Adp [NCBI NR]
  • gi|157830501|pdb|1BYI|A Chain A, Structure Of Apo-Dethiobiotin Synthase At 0.97 Angstroms Resolution [NCBI NR]
  • gi|157829729|pdb|1A82|A Chain A, Dethiobiotin Synthetase From Escherichia Coli, Complex With Substrates Atp And Diaminopelargonic Acid [NCBI NR]
  • gi|1065329|pdb|1DBS| Chain , Dethiobiotin Synthetase (E.C.6.3.3.3) [NCBI NR]
  • (P13000) Dethiobiotin synthetase (EC 6.3.3.3) (Dethiobiotin synthase) (DTB synthetase) (DTBS) [Swiss-Prot]
  • Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp, Inorganic Phosphate And Magnesiumgi|4389237|pdb|1BS1|A Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp , Inorganic Phosphate And Magnesiumgi|5542146|pdb|1BYI| Structur [nrdb_11152004_Chlamydomonas]
  • Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid And 5'-Adenosyl-Methylene-Triphosphate [nr-271106-contam.fasta]
  • Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp , Inorganic Phosphate And Magnesium [nr-271106-contam.fasta]
  • Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid, Adp, And Calcium [nr-271106-contam.fasta]
  • Chain A, Dethiobiotin Synthetase From Escherichia Coli, Complex Reaction Intermediate Adp And Mixed Anhydride [nr-271106-contam.fasta]
  • Chain A, Dethiobiotin Synthetase Complexed With Dethiobiotin, Adp, Inorganic Phosphate And Magnesium [nr-271106-contam.fasta]
  • Chain , Dethiobiotin Synthetase Complexed With Adp [nr-271106-contam.fasta]
  • Chain , Dethiobiotin Synthetase From Escherichia Coli, Complex With Substrates Atp And Diaminopelargonic Acid [nr-271106-contam.fasta]
  • Chain , Dethiobiotin Synthetase Complexed With 7-(Carboxyamino) -8-Amino-Nonanoic Acid [nr-271106-contam.fasta]
  • Chain , Dethiobiotin Synthetase Complexed With 7,8-Diamino-Nonanoic Acid, 5'-Adenosyl-Methylene-Triphosphate, And Manganese [nr-271106-contam.fasta]
  • Chain , Dethiobiotin Synthetase (E.C.6.3.3.3) [nr-271106-contam.fasta]
  • Chain , Dethiobiotin Synthetase Complexed With 3-(1-Aminoethyl) Nonanedioic Acid [nr-271106-contam.fasta]
  • Chain , Structure Of Apo-Dethiobiotin Synthase At 0.97 Angstroms Resolution [nr-271106-contam.fasta]
    • Organism: Escherichia coli
    Length: 224 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SKRYFVTGTD TEVGKTVASC ALLQAAKAAG YRTAGYKPVA SGSEKTPEGL RNSDALALQR  60
   61 NSSLQLDYAT VNPYTFAEPT SPHIISAQEG RPIESLVMSA GLRALEQQAD WVLVEGAGGW 120
  121 FTPLSDTFTF ADWVTQEQLP VILVVGVKLG CINHAMLTAQ VIQHAGLTLA GWVANDVTPP 180
  181 GKRHAEYMTT LTRMIPAPLL GEIPWLAENP ENAATGKYIN LALL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Noble WS, et al. (2009) Manuscript in preparation. BIOD_ECOLI gi|189095939, gi...

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..224] PSI-BLAST 44.39794 DETHIOBIOTIN SYNTHETASE FROM ESCHERICHIA COLI, COMPLEX WITH SUBSTRATES ATP AND DIAMINOPELARGONIC ACID

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.37148167194523 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle