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Protein Overview: AROD_ECOLI

General Information:
Name(s) found: AROD_ECOLI [Swiss-Prot]
Description(s) found:
Found 9 descriptions.
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  • 3-dehydroquinate dehydratase (EC 4.2.1.10) (3-dehydroquinase) (Type I DHQase) - Escherichia coli [Swiss-Prot]
    • Organism: Escherichia coli
    Length: 252 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTVTVKDLV IGTGAPKIIV SLMAKDIASV KSEALAYREA DFDILEWRVD HYADLSNVES  60
   61 VMAAAKILRE TMPEKPLLFT FRSAKEGGEQ AISTEAYIAL NRAAIDSGLV DMIDLELFTG 120
  121 DDQVKETVAY AHAHDVKVVM SNHDFHKTPE AEEIIARLRK MQSFDADIPK IALMPQSTSD 180
  181 VLTLLAATLE MQEQYADRPI ITMSMAKTGV ISRLAGEVFG SAATFGAVKK ASAPGQISVN 240
  241 DLRTVLTILH QA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..252] PSI-BLAST 81.69897 Native 3-dehydroquinase from Salmonella typhi

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  3.04075198078553 bayes_pls_golite062009
  • 3-deoxy-7-phosphoheptulonate synthase activity
    		•  2.96394105633886 bayes_pls_golite062009
  • lyase activity
    		•  1.40463692440932 bayes_pls_golite062009
  • dihydrodipicolinate synthase activity
    		•  1.2687335039487 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  1.10805171525041 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.00678396839999 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  0.19603703811218 bayes_pls_golite062009
  • 3-deoxy-8-phosphooctulonate synthase activity
    		•  0.11229304382048 bayes_pls_golite062009
  • carbon-oxygen lyase activity
    		•  0.0228214205561801 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle