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Protein Overview: orf19.13287, orf...

General Information:
Name(s) found: orf19.5865 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.13287 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • orf19.5865 CGDID:CAL0002409 Assembly 19, Contig19-10236 (21961, 24558) CDS, translated using codon table 12 (865 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.5865 CGDID:CAL0002409 Assembly 19, Contig19-20236 (21938, 24535) CDS, translated using codon table 12 (865 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 865 amino acids

    Gene Ontology:
    Cellular Component: U2-type catalytic step 1 spliceosome [IEA]
    Biological Process: generation of catalytic spliceosome for first transesterification step [IEA]
    Molecular Function: RNA-dependent ATPase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTQTGKGVR RRRQELIDAD DNEEEEREQI TQQGPLKATS TIETAKPTPE SNTPPLPLPS  60
   61 PPAPAQHYKR PKSKYYQFKQ ELEELEIQED LSPRQQSRLE YLTNKLNNWN RNNNNNNNAS 120
  121 QNEYYNLPSL QQSKNDVLHQ KQQSFQPPRM NWEDEQFKRA DQLILQNDDK IHINDDKEYE 180
  181 FVFDQTQFVN YDDIEELPGN GEEEEEEESG IRDSDSIIGN KYDEVRKSLP VYSYREEFLK 240
  241 IINENQTLIV VGETGSGKTT QLPQYLHEAG YSRNNQVIAC TQPRRVAATS VANRVANEMQ 300
  301 VKLGEQVGYN IRFDDNCKDG VTVIKYVTDG MLLREFLQDP TLGKYSAIMI DEAHERTLST 360
  361 EILLSLLKDV MMTTRKDDLK IIIASATINA EKFSQFFNNA PILNIPGRRF PVKIHYTKQP 420
  421 EANYIQAAIT TIFQIHMTQP LPGDILVFLT GQDEIETMEE ILRDSILKLG DQIDPMIVCS 480
  481 IYANLPQELQ QKIFQPTPSN TRKIVLATNI AETSITIDGI SYVIDPGYVK QNVYNPTTGM 540
  541 ESLVVVPCSR ASADQRAGRA GRVGPGKCFR LFTKWSFYNE LDSNQQPEIQ RVNLTSVILL 600
  601 LLSLGINDLL GFEFMDPPSK EAIIKALNLL YALGALNTQG KLTKTGKKMS EFPLDPVFTK 660
  661 CILTSDKFDN TKQIISIIAM LNESSNLFYR PKDKKELADK RKQEFNDLQG DQFMLLKIWQ 720
  721 QWVDSGYSVQ WCQDYFIQYK TMKRIKNIYE QLIRLSKKIG IEVNSRHQHR DHLQENTDNN 780
  781 TLLTKCLISG FFNNIVKLSP MGDCYQKLTN GKGGNNTPCY IHPSSCIYKL KPKPKYLLYY 840
  841 ELVLTSKEYM RNCIILDEKL IKEYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle