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Protein Overview: orf19.12955, orf...

General Information:
Name(s) found: orf19.5500 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.12955 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.5500 CGDID:CAL0006057 Assembly 19, Contig19-10228 (43309, 42362) CDS, reverse complemented, translated using codon table 12 (315 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.5500 CGDID:CAL0006057 Assembly 19, Contig19-20228 (43312, 42365) CDS, reverse complemented, translated using codon table 12 (315 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 315 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IEA]
    preribosome, large subunit precursor [IEA]
    Biological Process: maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    ribosomal large subunit biogenesis [IEA]
    maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDDIVWQTI NHQFCAFKVK TDKGQNFCRN EYNVSGLCNR QSCPLANSRY ATVKNVGGKL  60
   61 YLYMKTAERT HMPNRWWERI KLSKNYNKAL KQIDERLQYW QKFLIHKCKQ RFTRLTQVAI 120
  121 TERRLALQEG DNERHYVGVK NKVKRREQNR ERKALAAAKI EKAIEKELLE RLKSGAYGDK 180
  181 PLNVDENIWK KVMGKVDDEQ EEEDEEEFED DIDLVSGDED DESDVGEVEY VEDSGDDELL 240
  241 DMEDVEKWLG DSSDEEDGES SSSSSEEESS DEEESGSRKR KSESDEKAKK KKKRRPRVEI 300
  301 EYEQEEEPLH TNIAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle