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Protein Overview: orf19.12862, orf...

General Information:
Name(s) found: orf19.5407 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.12862 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.5407 CGDID:CAL0005164 Assembly 19, Contig19-10227 (70511, 71821) CDS, translated using codon table 12 (436 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.5407 CGDID:CAL0005164 Assembly 19, Contig19-20227 (70499, 71809) CDS, translated using codon table 12 (436 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 436 amino acids

    Gene Ontology:
    Cellular Component: small-subunit processome [IEA]
    nucleolus [IEA]
    90S preribosome [IEA]
    Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVKTISRSS DTYIPVKNTQ ESALPRNLNP ALHPFERARE YTRALQATKL ERMFAQPFIG  60
   61 QLGDGHRDGV YFIAKNYQAT NQIASGSGDG IIKYWNLTDR LETASFKAHY GMVSGICIYA 120
  121 NKMYSCGDDK TIKIWSVNSD DFDIKVNDDV DGIYRNQLGG AGGGDGKTSG GLLKTFIGEH 180
  181 SFKGIDHHRD DDLFVTGGAT IQLWDVNRSK HISDLSWGAD NVGTVKFNQT ETNIIASSGS 240
  241 DNSIVLYDIR TNTPVHKVVT SLRNNCITWN PMEAFNFATG NEDHNGYLYD MRNLQKTLKV 300
  301 YKGHVGAIMD VDFAPTGQEL VTGSYDKTIR LWKTLDGRSK DVYHTKRMQK VFSVKYSTDS 360
  361 KYIISGSDDT NLRVWRSDAS SRSNIKSSRQ RAKLEYQDKL KERYKYMPEI NRIARHRHLP 420
  421 KPVKKAQDMK RLYSKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle