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Protein Overview: orf19.4945, orf1...

General Information:
Name(s) found: orf19.4945 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.12411 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • MSH6 CGDID:CAL0006305 Assembly 19, Contig19-10216 (86663, 83019) CDS, reverse complemented, translated using codon table 12 (1214 residues)||Protein similar to S. cerevisiae Msh6p, which is involved in mismatch repair; repressed under Cdc5p depletion [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • MSH6 CGDID:CAL0006305 Assembly 19, Contig19-20216 (86660, 83016) CDS, reverse complemented, translated using codon table 12 (1214 residues)||Protein similar to S. cerevisiae Msh6p, which is involved in mismatch repair; repressed under Cdc5p depletion [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 1214 amino acids

    Gene Ontology:
    Cellular Component: MutSalpha complex [IEA]
    Biological Process: meiotic mismatch repair [IEA]
    Molecular Function: ATPase activity [IEA]
    ATP binding [IEA]
    four-way junction DNA binding [IEA]
    guanine/thymine mispair binding [IEA]
    single base insertion or deletion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGQVSTPTRS SPNVGSNSTG STKKQSSLMD FFKPMASKDK SKPKQQPSPL SSSPLKSKSN  60
   61 DTKPFLSSDK ENDDHSIMEN HKNTTLVTSQ PDDSGDKQIK PQLASSPKRE ELKKERKQQP 120
  121 LREKTTAALN SSPVAATRRS KQINYAESDD EEEVFTSRKK RRVVQDDSEE EEDDFKPAES 180
  181 GSDDDDDMSD FVVDDDKDED MEPVSDDDDE VVAPKTKSKK PLSKSSKPTS SSVSGILGRF 240
  241 DAGSGSFRQS SSVATPKPKS TTIKSLTPSK KSFEKENEER YQWLVDIRDA EKRPIDHPDY 300
  301 DPRTLYIPQS AWSKFTAFEK QYWQIKSKMW NTVVFFQKGK FYELYENDAV IANTQFDLKI 360
  361 AGGGRANMKL AGIPEMSFEY WAKEFISHGY KVAKVEQKES MLVKQMRGGA TKEEKIIERE 420
  421 LKGILTAGTL TNLDMISNDM ATYCLSIKEE DKEDGTKTFG VAFVDTATSE LNFIELDDDA 480
  481 ECTKLDTLIT QINPKEIICE KGNLCQIATK ILKFCTHSDH QIWNALNPIT EFWDYDIALE 540
  541 QLVKAKYYDA ENLDDYSNYP KVLVDFKENH QVAFNAFGGL LYYLKMLKLD TSIMSLGNIH 600
  601 EYHISRNSAS HMILDGVTLN NLEILNNTSD GTTKGTLFKL VNRATTSFGK RQLQKWVLHP 660
  661 LFKVDEINQR YDSVDYLMND GLELRSILQD TLANIPDLER LLARVHGGTL KFRDFLKVIE 720
  721 SFESIAGVSS KLVDFTNVES GMLYKYLKSF PHEMRELIQQ WEDAFDREQA KNDIIVPSAG 780
  781 TDEEFDNSQA SMEDLKTQLD KLLKEYKRTY KSQEICYRDS GKEIYLIEVP FKLKVPGDWK 840
  841 QMGSTSKVKR YYSPEVETLA KELRGQQELH KMVCDTLKIR MYEKFDKHYN VWMQVIQTIA 900
  901 NIDCLLALTK ASETIGYPSC RPKLIEADKG CINFKELRHP CFVSTKEFIP NDVQLGGDEP 960
  961 HFGLLTGANA AGKSTLMRTT ALAIILSQIG CYIPAESAEL TPVDRIMTRL GANDNILQGK1020
 1021 STFFVELSET KKILSNATPR SLVILDELGR GGSSSDGFAI AESVLHHLAT HVQSLGFFAT1080
 1081 HYGTLGLSFK THPQIKQLRM GIVVDSGSRN ITFLYKLETG TAPKSFGMNV ASMCGIPDAI1140
 1141 VDNAEIAAKA YEQTSKLKKL AEESKGDDIS LGLQSDFVWL ATGKINDLSK DILKYDEPIK1200
 1201 KSALENIYKM IDRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle