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Protein Overview: orf19.4582, orf1...

General Information:
Name(s) found: orf19.4582 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.12051 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.4582 CGDID:CAL0002905 Assembly 19, Contig19-10212 (32596, 33318) CDS, translated using codon table 12 (240 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.4582 CGDID:CAL0002905 Assembly 19, Contig19-20212 (32594, 33316) CDS, translated using codon table 12 (240 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 240 amino acids

    Gene Ontology:
    Cellular Component: cytoplasmic exosome (RNase complex) [IEA]
    nuclear exosome (RNase complex) [IEA]
    Biological Process: polyadenylation-dependent snoRNA 3'-end processing [IEA]
    U4 snRNA 3'-end processing [IEA]
    U1 snRNA 3'-end processing [IEA]
    rRNA catabolic process [IEA]
    nuclear polyadenylation-dependent CUT catabolic process [IEA]
    nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay [IEA]
    nuclear mRNA surveillance [IEA]
    U5 snRNA 3'-end processing [IEA]
    nuclear polyadenylation-dependent tRNA catabolic process [IEA]
    exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MELYSPEGLR IDGRRWNELR RFECRINTHP NSSDGSSYVE QGNTKVMCTV QGPIEPALRS  60
   61 QQHSERANIE VNLNIASFST FERKKRSRNE RRLVELKTTL EKTFEESVMI NLYPRTNIVI 120
  121 NVQVLCQDGG MLAAVINSIT LALIDAGISM YDYVSGVSCG LYDQTPLLDV NNLEEHDMSC 180
  181 LTVGVIGKSE KLALMLLEDK MPLDRLESVL SIGIAGSHKI RELMDQEVRK HGIIRASKMQ 240
  241

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle