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Protein Overview: orf19.11845, orf...

General Information:
Name(s) found: orf19.4367 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.11845 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • SMC1 CGDID:CAL0001080 Assembly 19, Contig19-10203 (42218, 38496) CDS, reverse complemented, translated using codon table 12 (1240 residues)||Protein described as similar to chromosomal ATPases; RNA abundance regulated by tyrosol and cell density [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • SMC1 CGDID:CAL0001080 Assembly 19, Contig19-20203 (42198, 38476) CDS, reverse complemented, translated using codon table 12 (1240 residues)||Protein described as similar to chromosomal ATPases; RNA abundance regulated by tyrosol and cell density [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 1240 amino acids

    Gene Ontology:
    Cellular Component: nuclear mitotic cohesin complex [IEA]
    Biological Process: mitotic sister chromatid cohesion [IEA]
    double-strand break repair [IEA]
    Molecular Function: double-stranded DNA binding [IEA]
    DNA secondary structure binding [IEA]
    AT DNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRLIGLELF NFKSYKGKSI IGFGSSYFTS IIGPNGAGKS NMMDAISFVL GVNSYHLRSQ  60
   61 NLKDLIYRGR RNIDTDSTTL DAIEQDPTSA YVMATYEKDD GEILKLKRTI TASGNSDYQI 120
  121 NGQSVTMLNY SMVLKQENIL IKARNFLVFQ GDVETIASQN PKDLTKLIET ISGSNEYINE 180
  181 YERLKEEHEK AHELTTSVFS RKRTLNSESK QYKEQMAEQR QFEEKIITKN DTVKKINLYK 240
  241 LFHNEKKHNQ LKDEIKSKNE ELKLAKKELS NKEKTYKSIM TDYSSSVLNA KKQKQQTEAA 300
  301 QQKIDSTKRE LIPVEANQRS LSNKINFHKL KVGDLVKDIA RQKTQVSSVE RQLRDAQRMF 360
  361 DDFQAKIAAA VASSTNISPE AQKEYEELRS KFLAENGSEL EEQISLLLNN KDSLNSAKSN 420
  421 LENQKTNAEH RIAELESIVA TDLKSKLHDV SNEINEVLDK KSDKVEARNA LIKQKDEFNH 480
  481 EELKLNTRLR DVLVKLDELA SQQRESNKQK KLRENVATLK RLFPQGAIKG LVYELVRPTQ 540
  541 QKYESALATL LGPNFDSIIV ESSAVAYKCI DILKERRAGV ATFIPLDSIE TDIINLSHLR 600
  601 SIHPSALPGV DIIEYQDKSL EPAVNYIIGN TVVVDTIDTA RNLKWQSNTR FDNKIVTLQG 660
  661 SVIHKSGLMT GGQQQQKSSA SLSWSKQEWT KLNELKEELN QKIFKLQEKR PKDLEINLLA 720
  721 EEIGALDDKL PVLRNQKTSI ERIIKDRESE IEFQTGLFKG FDKSIQEKMN EITKINGKID 780
  781 KVNEKMKSSK DLIFAEFCEK YGFVNGIEDY ENMHGSTLRV RAKERAQFSK TISVLQNKLD 840
  841 FEKERLKETK DRRKSIESLI VDLEDDLAKV LTEKKKLEES LDKAEAEYEV LQTEISQFDD 900
  901 SMQSQLKTSK SIESDLDDSK SLVSTLVKEI TQIEENLLKT DSERANVLRN CKIQNINLPL 960
  961 IDGDLDSISV GENLESSIKE VYKIELDYEM LEERFKEVFN NKLQSELEVI LQNTISDLEK1020
 1021 LTPNAKAIER LREVETKLRN YDKEYNVARQ KERQVNERFK KVQEKRYDKF MDAFNHISGC1080
 1081 IDSIYKELTK SAMSPLGGSA YLTLEDEDSP FLSGIKYHAM PPMKRFRDME LLSGGEKTMA1140
 1141 ALALLFAIHS YQPSPFFVLD EIDAALDNAN VARIGNYIKK YAGPNFQFIV ISLKNSLFEK1200
 1201 SDALVGIYRE QRENSSKTVT LDLREYPDDD VPLSTVTATT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle