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Protein Overview: orf19.3349, orf1...

General Information:
Name(s) found: orf19.3349 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.10857 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.3349 CGDID:CAL0004145 Assembly 19, Contig19-10173 (123686, 119982) CDS, reverse complemented, translated using codon table 12 (1234 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.3349 CGDID:CAL0004145 Assembly 19, Contig19-20173 (123952, 120248) CDS, reverse complemented, translated using codon table 12 (1234 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 1234 amino acids

    Gene Ontology:
    Cellular Component: mitochondrion [IEA]
    DNA-directed RNA polymerase II, core complex [IEA]
    Biological Process: response to drug [IMP]
    transcription from RNA polymerase II promoter [IEA]
    Molecular Function: DNA-directed RNA polymerase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSADESMADP YQYDSIDEPI TQEDCWTVIT SFFQEKGLVS QQLDSFDEFV ETSIQELVWE  60
   61 DSHLILDQPA QHTSEKDHEN KRYEITFGKI YISKPSQTEG DGSTHAVFPQ EARLRNLTYS 120
  121 SPLYVDMTSK VFKSDDNKRK DNELEWIQEE PDKDTETKVF LGKVPIMLRS KFCMLRDLAE 180
  181 HEFYELKECP YDMGGYFVIN GSEKVLIAQE RSAANIVQVF KKAAPSPISH VAEIRSAIEK 240
  241 GSRLISSMQI KLYGRDEKGV SGRTIKATLP YIKEDIPIVI VFRALGVVPD GDILEHICYD 300
  301 ANDWQMLEML KPCVEEGFVI QEREVALDFI GRRGVLGIRR EKRIQYAKDI LQKELLPNIT 360
  361 QEEGFETRKA FFLGYMVNRL LLCALERKEP DDRDHFGKKR LDLAGPLLAN LFRILFKKLT 420
  421 KDIYNYMQRC VENGGDFNVT LAVKSQTITD GLRYSLATGN WGEQRKAMSS RAGVSQVLNR 480
  481 YTYSSTLSHL RRTNTPIGRD GKIAKPRQLH NTHWGLVCPA ETPEGQACGL VKNLSLMTCI 540
  541 SVGTPSEPIL GFLRDYGLEV LEDYVPSNAP DSTRVFVNGV WVGVHRDPAA LVDFMRELRR 600
  601 SGDLSPEVSI IRDIREKEFK IFTDAGRVYR PLFIVDDNPD SETKGELKIT KEHVKQLLRS 660
  661 DELDEDDEDY ENSRYTWSSL VADGIVEYVD AEEEETIMIA MTPDDVKASK NSVSESEQQK 720
  721 IQLEEQELDP GKRIKPTTSG NTHTYTHCEI HPSMILGVAA SIIPFPDHNQ SPRNTYQSAM 780
  781 GKQAMGVFLT NYSVRMDTMA NILYYPQKPL GTTRSMEYLK FRELPAGQNA IVAIACYSGY 840
  841 NQEDSMIMNQ SSIDRGLFRS LFFRSYMDIE KRQGMKALET FEKPTRSDTL RLKHGTYEKL 900
  901 DEDGLIAPGV RVSGEDIIIG KTTPIPADAE ELGQRTQYHT KRDASTPLRS TESGIVDQVL 960
  961 LTTNGDGSKF VKVRMRTTKV PQIGDKFASR HGQKGTIGVT YRHEDMPFTA EGIVPDLIIN1020
 1021 PHAIPSRMTV AHLIECLLSK VSSLSGFEGD ASPFTDVTTE QISTLLRDHG YQSRGFEVMY1080
 1081 NGHTGKKLMA QVFFGPTYYQ RLRHMVDDKI HARARGPVQV LTRQPVEGRS RDGGLRFGEM1140
 1141 ERDCMIAHGA AGFLKERLME ASDAFRVHVC GMCGLMSVIA NLKKNQFECR SCKNKTNIYQ1200
 1201 IHIPYAAKLL FQELMAMNIS PRLYTERSVS GIRV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle