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Protein Overview: orf19.10688, orf...

General Information:
Name(s) found: orf19.3178 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.10688 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
SHOW ALL
  • orf19.3178 CGDID:CAL0002401 Assembly 19, Contig19-10170 (39811, 38270) CDS, reverse complemented, translated using codon table 12 (513 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.3178 CGDID:CAL0002401 Assembly 19, Contig19-20170 (40781, 39240) CDS, reverse complemented, translated using codon table 12 (513 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: U2-type prespliceosome [IEA]
    Biological Process: nuclear mRNA splicing, via spliceosome [IEA]
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNFIEVQRS NIQEIGIIED SLSRRLLRNP YILPSNLQPR PNILVSKVTK PNSTKRISIL  60
   61 QQYELGYFKD RYNQIIKGLN HCLTDEKESF SRTLELITEP GDGFEKFDEM INGISSNDNI 120
  121 VEDPRKLYSS FSSLNKELNP QDVTLKINKK TGKEQEFVKR KHFLSSIASH LKNIEINDIL 180
  181 DLHHFHDLYV SNFGPISYIE YLYKFSSFPY TNVNGFYSKY LTELSRFLEA TLLKLQPLLD 240
  241 YNALLQNWKK EYDNANEERK SNGNDGDKLF CKACNKLFSK ETVYQSHLSG KKHKKNASQQ 300
  301 NPDNFVSSLP WLEYFIEKLC QVLAPELEYT RAQVEKLSNL SERELQLDRQ VQHDIENEFV 360
  361 AINNEFDDDD LSQNEHGDDD DNDDYLDDSF KNLPLGPDGT PIPFWLYKLQ ELHKQYNCEI 420
  421 CGNISYKGKS VFMKHFSGSK HQYGLKCLGV DEKNMKMFKN ITKIDEATEL WKVLRKETKL 480
  481 KVTELENSVE VEDKEGNVML EKDYIDLKKQ GLL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle