General Information: |
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Name(s) found: |
orf19.3098
[Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.10610 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta] |
Description(s) found:
Found 2 descriptions. SHOW ALL |
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Organism: | Candida albicans |
Length: | 1987 amino acids |
Gene Ontology: |
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Cellular Component: |
U4/U6 x U5 tri-snRNP complex
[IEA]
U5 snRNP [IEA] |
Biological Process: |
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)
[IEA]
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Molecular Function: |
ATP-dependent RNA helicase activity
[IEA]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSNNVIRQQR DRNHEEEIPA SSMTGRISKS DMRSNYKSSP APAQLNKPPR KEPESEPVDD 60 61 QLYELFVTKI RSYLPDSSHE VIQSASEVAS EQLSNRDISV PEKRKELEEL LNASISDDDL 120 121 HELINLSNSI ESAKQNHQQG NGDDEFVAID FNSSDDEEQA IEAEIEVEDE SDKETDTEEP 180 181 TSNEHPKAYD WHWLQQISEF KHYGSQVFDL LADKDLDSLQ LDSKLNELLD SKGMDFIVKC 240 241 IEHRWRIVFS KRLQTENKEP VIKEMEELGL HSLINELHRK RSLDDETSNP LKRQKKVKRV 300 301 PQKISLDRIV FSTSVENARV TLPEGTIHEV KKSYDTITVP APAQSLSDND ELLPISTLPD 360 361 WAQEAFPKTE TTTFNRIQSK IYNQAFETDN NLLICAPTGA GKTNVAMLTI LRTIENFRNN 420 421 GHIQLKNFKI VYIAPLKALV QEQMREFQRR LTSVYGVVVN ELTGDSSLSK QQIAETQIIV 480 481 TTPEKWDIIT RKDPSYVKLV KLMIIDEIHL LHDERGPVLE SLVSRAIRKS ETTGSDIRIV 540 541 GLSATLPNYA DVAKFIRAKP EGLFYFDASY RPCPLEQVYI GVKEQKAIKR IAAMNEACYD 600 601 RMHQSLQDRH QLIIFVHSRK ETFTTAKYLM EKLDIDIVEQ EGVKEILKQE GESMSNPKLK 660 661 EVIPRGFGIH HAGLTKKDRG VVEDLFAQGY LRVLVSTATL AWGVNLPAHT VIIKGTETYS 720 721 PESGAWVQLS PQDILQMLGR AGRPRYDKNG EGIIITSQDE VQYYLAILNQ QLPIESQLIH 780 781 KLVDNINAEI VAGSITTIEE GIEWLTYTYF FVRMLQSPAL YGVEATYDFT NDPTLYNRRA 840 841 DLIYTAFCIL HENKLVVYNA ALGSVASTEL GKIASHFYIN FETINLYGKM LKPWHSETDI 900 901 LSVFSNSGEF KYVPVRQEER LEISKLMEKC PIPIKEQPNE PLAKINILLQ TFISRLSLEG 960 961 YALIADMIYI TQSAGRLLRA LYEIALLQKW SSLAKSILNL CKMVDKRLWL NNSPLRQFGD1020 1021 VVPHQIIRAS EMSHLPWIRY FHLNPDELAV ALNLKGNAQI AKQYIDSFPK VSIQYMVQPI1080 1081 TEQFLRIQVE VIPEWSWISA IHGSQEIFNV FLEGCDGNKL LHSEQFIVKR KNINKPHILE1140 1141 FFVPFVAPPL PNYILSFVSE KWVHCTWKSS ILLSDVISPK VSPHYLDNNV DLVPTETVGD1200 1201 LFPFTHFNKL QSSTFDTVYN SENNVFIGSS KGDGKTVLAE LAILNHWNNK KGRIVYINPC1260 1261 QELVDKLFKK WSTFFSSYEK EINVLSGNLR EDSASVNQSH LILATPEQFN CLSKRWKTRK1320 1321 AFRSIDLFIW DDLHLVGSDV HYEMLVTRVR MLTSQWDDYK LRIVALSSPV LNSRDIAEWI1380 1381 GVAKSETFNF APHSRENRIT EIKLSVESSD NTVKIYKDLA KVNSGLRNTL IFAPSYIHAF1440 1441 EMAHSMVENN QAQEWRSVDL LKLEKYISKI QNPLLKNLLP KGIAVFYSGM ARVDRLIVER1500 1501 LFESKSIGVL FCTMDTSKFA PTANNVFVAG TRVYDGHEHR FLDYPLNDLY EMVGCCQDGG1560 1561 VVHIYTTSQM VEFYSSFLNS GLAVESLLSN SLHEFFMDAV ANGIIKQRQN CIDVLTFTFF1620 1621 YRRLLKNPSF YDLKEVSNSG ISTYLSELIE SVFDDFNKEE FIEEEDEGDT ISPLNKIVIA1680 1681 SHYNSTFETV SNLSKLSNKS KLKDIFHALT NATEFSDLPV REGEDALLIK LQTKLPIKYS1740 1741 QDDYESPFFK AFILLQAHIS RISIPFDLRQ DQKSVLTRVL QILNAAIDIL SSDGSLNVLL1800 1801 AMDLSQMIVQ AVWSSDNPLR QVPRFTNEIL ARCTQHNVET VYDIMSLEDE ERNEILQLPD1860 1861 QELNEVASFV NSYPNIELSY EMKGGVTSNE SKFVTVTIDR DEEIESLEVV KNENFPVTKQ1920 1921 ENWWIVVGDS KTRHLYGIKK VNIQKISQSF EIEFTIPNKG KHELTIYLIC DSYLDADKEM1980 1981 EFVIDVV |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)