| General Information: |
|
| Name(s) found: |
orf19.3098
[Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.10610 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta] |
| Description(s) found:
Found 2 descriptions. SHOW ALL |
|
| Organism: | Candida albicans |
| Length: | 1987 amino acids |
Gene Ontology: |
|
| Cellular Component: |
U4/U6 x U5 tri-snRNP complex
[IEA]
U5 snRNP [IEA] |
| Biological Process: |
spliceosome conformational change to release U4 (or U4atac) and U1 (or U11)
[IEA]
|
| Molecular Function: |
ATP-dependent RNA helicase activity
[IEA]
|
| Sequence: |
|
| Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51
| | | | | |
1 MSNNVIRQQR DRNHEEEIPA SSMTGRISKS DMRSNYKSSP APAQLNKPPR KEPESEPVDD 60
61 QLYELFVTKI RSYLPDSSHE VIQSASEVAS EQLSNRDISV PEKRKELEEL LNASISDDDL 120
121 HELINLSNSI ESAKQNHQQG NGDDEFVAID FNSSDDEEQA IEAEIEVEDE SDKETDTEEP 180
181 TSNEHPKAYD WHWLQQISEF KHYGSQVFDL LADKDLDSLQ LDSKLNELLD SKGMDFIVKC 240
241 IEHRWRIVFS KRLQTENKEP VIKEMEELGL HSLINELHRK RSLDDETSNP LKRQKKVKRV 300
301 PQKISLDRIV FSTSVENARV TLPEGTIHEV KKSYDTITVP APAQSLSDND ELLPISTLPD 360
361 WAQEAFPKTE TTTFNRIQSK IYNQAFETDN NLLICAPTGA GKTNVAMLTI LRTIENFRNN 420
421 GHIQLKNFKI VYIAPLKALV QEQMREFQRR LTSVYGVVVN ELTGDSSLSK QQIAETQIIV 480
481 TTPEKWDIIT RKDPSYVKLV KLMIIDEIHL LHDERGPVLE SLVSRAIRKS ETTGSDIRIV 540
541 GLSATLPNYA DVAKFIRAKP EGLFYFDASY RPCPLEQVYI GVKEQKAIKR IAAMNEACYD 600
601 RMHQSLQDRH QLIIFVHSRK ETFTTAKYLM EKLDIDIVEQ EGVKEILKQE GESMSNPKLK 660
661 EVIPRGFGIH HAGLTKKDRG VVEDLFAQGY LRVLVSTATL AWGVNLPAHT VIIKGTETYS 720
721 PESGAWVQLS PQDILQMLGR AGRPRYDKNG EGIIITSQDE VQYYLAILNQ QLPIESQLIH 780
781 KLVDNINAEI VAGSITTIEE GIEWLTYTYF FVRMLQSPAL YGVEATYDFT NDPTLYNRRA 840
841 DLIYTAFCIL HENKLVVYNA ALGSVASTEL GKIASHFYIN FETINLYGKM LKPWHSETDI 900
901 LSVFSNSGEF KYVPVRQEER LEISKLMEKC PIPIKEQPNE PLAKINILLQ TFISRLSLEG 960
961 YALIADMIYI TQSAGRLLRA LYEIALLQKW SSLAKSILNL CKMVDKRLWL NNSPLRQFGD1020
1021 VVPHQIIRAS EMSHLPWIRY FHLNPDELAV ALNLKGNAQI AKQYIDSFPK VSIQYMVQPI1080
1081 TEQFLRIQVE VIPEWSWISA IHGSQEIFNV FLEGCDGNKL LHSEQFIVKR KNINKPHILE1140
1141 FFVPFVAPPL PNYILSFVSE KWVHCTWKSS ILLSDVISPK VSPHYLDNNV DLVPTETVGD1200
1201 LFPFTHFNKL QSSTFDTVYN SENNVFIGSS KGDGKTVLAE LAILNHWNNK KGRIVYINPC1260
1261 QELVDKLFKK WSTFFSSYEK EINVLSGNLR EDSASVNQSH LILATPEQFN CLSKRWKTRK1320
1321 AFRSIDLFIW DDLHLVGSDV HYEMLVTRVR MLTSQWDDYK LRIVALSSPV LNSRDIAEWI1380
1381 GVAKSETFNF APHSRENRIT EIKLSVESSD NTVKIYKDLA KVNSGLRNTL IFAPSYIHAF1440
1441 EMAHSMVENN QAQEWRSVDL LKLEKYISKI QNPLLKNLLP KGIAVFYSGM ARVDRLIVER1500
1501 LFESKSIGVL FCTMDTSKFA PTANNVFVAG TRVYDGHEHR FLDYPLNDLY EMVGCCQDGG1560
1561 VVHIYTTSQM VEFYSSFLNS GLAVESLLSN SLHEFFMDAV ANGIIKQRQN CIDVLTFTFF1620
1621 YRRLLKNPSF YDLKEVSNSG ISTYLSELIE SVFDDFNKEE FIEEEDEGDT ISPLNKIVIA1680
1681 SHYNSTFETV SNLSKLSNKS KLKDIFHALT NATEFSDLPV REGEDALLIK LQTKLPIKYS1740
1741 QDDYESPFFK AFILLQAHIS RISIPFDLRQ DQKSVLTRVL QILNAAIDIL SSDGSLNVLL1800
1801 AMDLSQMIVQ AVWSSDNPLR QVPRFTNEIL ARCTQHNVET VYDIMSLEDE ERNEILQLPD1860
1861 QELNEVASFV NSYPNIELSY EMKGGVTSNE SKFVTVTIDR DEEIESLEVV KNENFPVTKQ1920
1921 ENWWIVVGDS KTRHLYGIKK VNIQKISQSF EIEFTIPNKG KHELTIYLIC DSYLDADKEM1980
1981 EFVIDVV |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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| Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
| Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)