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Protein Overview: orf19.10203, orf...

General Information:
Name(s) found: orf19.2688 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.10203 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • orf19.2688 CGDID:CAL0003534 Assembly 19, Contig19-10158 (60451, 62970) CDS, translated using codon table 12 (839 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.2688 CGDID:CAL0003534 Assembly 19, Contig19-20158 (53550, 56069) CDS, translated using codon table 12 (839 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 839 amino acids

    Gene Ontology:
    Cellular Component: small-subunit processome [IDA]
    RENT complex [IEA]
    rDNA heterochromatin [IEA]
    t-UTP complex [IEA]
    Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    positive regulation of transcription from RNA polymerase I promoter [IEA]
    Molecular Function: snoRNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSAISEWSL SMATGGKPLY LPCSQTTASV YSQDGRYVII ALTHQLRVYF ISTRQCIKTI  60
   61 DLDLHDLADL KIDVTNGNQV LLFKTSGEIL TVNWKDKVSQ PIISTIDINK TQSGTSLPLL 120
  121 SVISVKHLFF IIVTGRKEKK KGTPHTRYIN YFDRNSESLV PIIEVANSIN FATSLDNTKI 180
  181 AFITSGNEID LFDLSGIFNV DSIENLSDND IVKETIPFVY RSPVTSIAVS NDSMIAIGTS 240
  241 AGPIQIVYGG LTTPKPQRVL KWHLDQVKGL MFTADNNYLL SGGMEKVLVF WQLETEKKQF 300
  301 LPRLNGVIDK ISIDNYKNDY ISLQLNVDPL DNNYEILVLS AVDLVSRLSV NTVRPKFAYN 360
  361 IATTLSKTKK KFIKSSSDFD KFKIRYDYTS QFEIHPKTKS MYFPNGALIQ SFDLFKNEQN 420
  421 FIQHGAPVLG VGKVRSETKL LDPLVTLLKF THDGEWMCTF DEFTNTEVDS LLLKNEKQYA 480
  481 LKFWKYVGHK ENATSGINNN NKTGHWELTT KIIDPHGMNP ILAMIPAPTS YFNGLAFLTA 540
  541 DDKGGLRIWR PSVPKEQYKT TSARSQQTAW TLRKSRAPSA LSSDAVALSW SDDNSLIFLA 600
  601 HECSILTIDS KSFEEIPDFK IPSLSGSRVR SLNMVNNNLI VLSKTRISSF DLITGELTSL 660
  661 VAKVNTTIGA KNLIAIDPIK RLICLALNYY SEENNTLSIK SKILIFKPNQ LKPICVQLHE 720
  721 QGVSSIRYFN SSFVFVDLDC RVGTIYSNEE ITETIELGLT QEINNMLIAA QATADVINDR 780
  781 NVKTTVGHQN GNKEGEMDID NSMAYAAKVV DLHTFQPIFQ NIEGVQVESL FERIVNVLK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle