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Protein Overview: orf19.1633, orf1...

General Information:
Name(s) found: orf19.1633 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
orf19.9201 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
Description(s) found:
Found 2 descriptions.
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  • orf19.1633 CGDID:CAL0006401 Assembly 19, Contig19-10123 (65172, 62941) CDS, reverse complemented, translated using codon table 12 (743 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
  • orf19.1633 CGDID:CAL0006401 Assembly 19, Contig19-20123 (64955, 62724) CDS, reverse complemented, translated using codon table 12 (743 residues)||Predicted ORF in Assemblies 19 and 20 [Other_Candida_Albicans_na_02-26-2007_reversed.fasta]
    • Organism: Candida albicans
    Length: 743 amino acids

    Gene Ontology:
    Cellular Component: small-subunit processome [IDA]
    t-UTP complex [IEA]
    Biological Process: maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) [IEA]
    positive regulation of transcription from RNA polymerase I promoter [IEA]
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDIHRCRFVD YTPHTITSLA FSHKSSLTSL PTADVRLAVG RSNGDIEIWN PRHNWTHELT  60
   61 LPGSKGRSIE GLCWSYNEQD PLEPPRLFSI GGSTYITEWD LSTGRPLINY DCNAGIIWCI 120
  121 DINPQNDRLT VGCDDGSVVI VDISGGRGSL EYDLICQRQD ARVLSVKWAN NEHVIGGCAD 180
  181 GRIRSWSSEG ETKGRLVATM KVDKAKTEST LVWSLTVLPN KKQFVSGDST GSIKIWDLTR 240
  241 FTLLQTFKIH DADVLCLVHD VKEEKIFSAG VDRKIHQFDL LNSKNSSKWT HSFNRLLHSN 300
  301 DVRSLAIFEN KNYNLLVSGG VERAIVVQNI ETFYDGKYKK LLINQQQSNI LIVPDSKLVI 360
  361 LWQDQTIKIW KVLPDGKHVL MSKLTLSADE NITSVDFKDN LLVVAKMTSV RFFELTEISD 420
  421 NKFKIQKIRD DKFDSLVEGA KIVKFIDANK VLILTPDEEL YTFDIDSDEG KIELNGEIEL 480
  481 LESTQQQQQQ QQRKNQHLLR INNLVLTPNK KQIIISRFNG SIEVYPIVNT ETEAYVLTKL 540
  541 SSYPHLIECV NDEKLVVINE ENKIFEFFIN DKDGQLLTPW SKRNSEFLPR QFISLQDKPE 600
  601 GMFIQQKQEK LWIYGSTWLS FFDLSMNIPI SKIYKNTSTS KKRNHDGLSM NEEIGELEDE 660
  661 TEEIIEASLK QSEIDRLRHQ IQTEDKDNQN NVDKTKKPFW ITEKYRPIMK AANFGGNDDI 720
  721 IVVERPYSSL QTGPAFDLPK IKV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle