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Protein Overview: AMT2_ARATH

General Information:
Name(s) found: AMT2_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • Ammonium transporter 2 OS=Arabidopsis thaliana GN=AMT2 PE=1 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 475 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: ammonium transport [TAS]
    response to nematode [IEP]
    Molecular Function: ammonium transmembrane transporter activity [ISS]
    high affinity secondary active ammonium transmembrane transporter activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGAYDPSLP EVPEWLNKGD NAWQLTAATL VGLQSMPGLV ILYASIVKKK WAVNSAFMAL  60
   61 YAFAAVLLCW VLLCYKMAFG EELLPFWGKG GPAFDQGYLK GQAKIPNSNV AAPYFPMATL 120
  121 VYFQFTFAAI TTILVAGSVL GRMNIKAWMA FVPLWLIFSY TVGAYSIWGG GFLYQWGVID 180
  181 YSGGYVIHLS SGVAGFVAAY WVGPRPKADR ERFPPNNVLL MLAGAGLLWM GWSGFNGGAP 240
  241 YAANLTSSIA VLNTNLSAAT SLLVWTTLDV IFFGKPSVIG AIQGMVTGLA GVTPGAGLIQ 300
  301 TWAAIIIGVV SGTAPWASMM IIHKKSALLQ KVDDTLAVFY THAVAGLLGG IMTGLFAHPD 360
  361 LCVLVLPLPA TRGAFYGGNG GKQLLKQLAG AAFIAVWNVV STTIILLAIR VFIPLRMAEE 420
  421 ELGIGDDAAH GEEAYALWGD GEKFDATRHV QQFERDQEAA HPSYVHGARG VTIVL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..475] PSI-BLAST 103.0 The mechanism of ammonia transport based on the crystal structure of AmtB of E. coli.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ammonium transmembrane transporter activity
    		•  10.0624820335928 bayes_pls_golite062009
  • organic cation transmembrane transporter activity
    		•  9.07420898067257 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  7.57181833547312 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  7.46308808953548 bayes_pls_golite062009
  • methylammonium transmembrane transporter activity
    		•  7.38326654060024 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  7.08971867997216 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  7.03159982829686 bayes_pls_golite062009
  • transporter activity
    		•  5.3870893301235 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  5.3046132351753 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  5.16067985999244 bayes_pls_golite062009
  • high affinity secondary active ammonium transmembrane transporter activity
    		•  3.34961792720479 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.81164277777293 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.08017669832334 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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