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Protein Overview: lgc-52

General Information:
Name(s) found: lgc-52 / CE36678 [WormBase]
Description(s) found:
Found 12 descriptions.
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  • WBGene00013517 locus:lgc-52 status:Partially_confirmed UniProt:Q9NA62 protein_id:CAB60529.2 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: postsynaptic membrane [IEALink to PubMed article]
    membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: ion transport [IEALink to PubMed article]
    transport [IEALink to PubMed article]
    Molecular Function: neurotransmitter receptor activity [IEALink to PubMed article]
    extracellular ligand-gated ion channel activity [IEALink to PubMed article]
    phosphopantetheine binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISPPPPPGN GEFHVIIALF IETILMSARI HDVTYQHIED FTCDDIGLSS LSGAKATDLA  60
   61 RILMTNYSRN ALPEPAPVKV EVEITIQDIS DISAITGTFT IDYWISAIWN DKRLAFSHLD 120
  121 PCRKNLSLDH DMEPKLWSPN VCIVNSKSTK VHDSPKPNIL LMIFPNGTIW LNYRIRSEAP 180
  181 CQMNLRNFPL DSIRCSLVFE SYSYNAADVE LQWLEWSPVS TVRNDYNLPD FRMTNITYGS 240
  241 VTEAYTAGMW HRLSVSIHFE RLYGFYILQM YLPTYISVFI SWIAFWMDTK ALPARITLSV 300
  301 SSLMALTFQF GNIVKSLPKA SYVKAIDIWM FSCVGFIFFS LIELAIVAYN DKMHDQRLRE 360
  361 VRCSVGNLNS NGIGQYNSTT RRSFVELSAR RAKGSELGAS IDRVASMLFP TMFALFNLVY 420
  421 WAYYLTTSMN PVYT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..434] PSI-BLAST 68.522879 Refined structure of the nicotinic acetylcholine receptor at 4A resolution.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle