| Protein: | lgc-52 |
| Organism: | Caenorhabditis elegans |
| Length: | 434 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for lgc-52.
| Description | E-value | Query Range |
Subject Range |
|
|
334.0 | [0..1] | [433..117] |
|
Region A: Residues: [1-434] |
1 11 21 31 41 51
| | | | | |
1 MISPPPPPGN GEFHVIIALF IETILMSARI HDVTYQHIED FTCDDIGLSS LSGAKATDLA 60
61 RILMTNYSRN ALPEPAPVKV EVEITIQDIS DISAITGTFT IDYWISAIWN DKRLAFSHLD 120
121 PCRKNLSLDH DMEPKLWSPN VCIVNSKSTK VHDSPKPNIL LMIFPNGTIW LNYRIRSEAP 180
181 CQMNLRNFPL DSIRCSLVFE SYSYNAADVE LQWLEWSPVS TVRNDYNLPD FRMTNITYGS 240
241 VTEAYTAGMW HRLSVSIHFE RLYGFYILQM YLPTYISVFI SWIAFWMDTK ALPARITLSV 300
301 SSLMALTFQF GNIVKSLPKA SYVKAIDIWM FSCVGFIFFS LIELAIVAYN DKMHDQRLRE 360
361 VRCSVGNLNS NGIGQYNSTT RRSFVELSAR RAKGSELGAS IDRVASMLFP TMFALFNLVY 420
421 WAYYLTTSMN PVYT
|
| Detection Method: |  |
| Confidence: | 68.522879 |
| Match: | 2bg9E |
| Description: | Refined structure of the nicotinic acetylcholine receptor at 4A resolution. |
Matching Structure (courtesy of the PDB): |
|
