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Protein Overview: CE36358

General Information:
Name(s) found: CE36358 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00011232 locus:pck-2 status:Partially_confirmed UniProt:Q7JKI1 protein_id:CAF31484.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 582 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: gluconeogenesis [IEALink to PubMed article]
    Molecular Function: GTP binding [IEALink to PubMed article]
    phosphoenolpyruvate carboxykinase activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVDPNLLTP YKNTGAANAS LRQISEDAFY VVNEVVMKRL GHVPILKGDF HLLPAKVQRF  60
   61 IAEKAELMRP RGIFICDGSQ HEADELIDKL IERGMLSKLE AYENNYICRT DPKDVARVES 120
  121 KTWMVTKNKY DTVTHTKEGV EPIMGHWLAP EDLATELDSR FPGCMAGRIM YVIPFSMGPV 180
  181 GGPLSKIGIQ LTDSNYVVLS MRIMTRVNND VWDALGNQDF VRCIHSVGLP RPVKQRVINH 240
  241 WPCNPERVLI AHRPPEREIW SFGSGYGGNS LLGKKCFALR IASNIAKDEG WMAEHMLIMG 300
  301 VTRPCGREHF IAAAFPSACG KTNLAMLEPT LPGWKVRCVG DDIAWMKFGE DGRLYAINPE 360
  361 AGFFGVAPGT SNKTNPMAVA TFQKNSIFTN VAETANGEYF WEGLEDEIAD KNVDITTWLG 420
  421 EKWHIGEPGV AAHPNSRFAA PANQCPIIHP DWESPQGVPI EAIIFGGRRP QGVPLIYETN 480
  481 SWEHGVFTGS CLKSEATAAA EFTGKTVMHD PMAMRPFMGY NFGKYLQHWL DLKTDSRKIF 540
  541 QNQFVPRWML KRRESRHCNY YTRFSRIISR LSNSFLFVLF FI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run hcp-1 hcp1 IP from december2004 Cheeseman, I.M., et al. (2005)
    View Run hcp-2 hcp2 ip from december Cheeseman, I.M., et al. (2005)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..582] PSI-BLAST 1000.0 Cytosolic phosphoenolpyruvate carboxykinase (GTP-hydrolysing)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoenolpyruvate carboxykinase activity
    		•  5.427657115096 bayes_pls_golite062009
  • phosphoenolpyruvate carboxykinase (ATP) activity
    		•  4.07297753409796 bayes_pls_golite062009
  • phosphoenolpyruvate carboxykinase (GTP) activity
    		•  3.22045404005498 bayes_pls_golite062009
  • catalytic activity
    		•  1.59551963655826 bayes_pls_golite062009
  • lyase activity
    		•  0.903636804009288 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.63361553348301 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.110170641189915 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle