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Protein Overview: CE36653

General Information:
Name(s) found: CE36653 [WormBase]
Description(s) found:
Found 15 descriptions.
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  • WBGene00010573 Uncharacterized protein K04H4.2 status:Partially_confirmed UniProt:P34504 protein_id:CAA81588.3 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 788 amino acids

    Gene Ontology:
    Cellular Component: extracellular region [IEALink to PubMed article]
    Biological Process: locomotory behavior [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed article]
    chitin metabolic process [IEALink to PubMed article]
    growth [IMPLink to PubMed article]
    Molecular Function: chitin binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLRNLILITL LVASGHGQTP VIGGTCKLGT ADVQIGGKQT QFFLKCETTA DSAEGEGVWV  60
   61 VKSRAAAAPS SVPSVPAENT QPQQHPKARK PASPNICEQD NGARESEVCA VSATCLQAHN 120
  121 DFPSSYLQCD QTTLRWVRKS CQENFLFNFE QQTCIVPKRM SSLSRQQASG LVCTFSSCSN 180
  181 SNPCSVGTCN NGYCCSSGSN SGSAIIVGGG SSNCVGCQNA PQIITIPQNS CPGGGYSVGG 240
  241 CSSGYCATGY SCIQNQCCPS YNSAPRISVY TCPSGGNAVG ACMSGRCASG YTCSNNVCCP 300
  301 QTTTTNPFVC PDGTQAAGGC VNGQCGTGYT CSNGLCCAGT STTVKCLDGS DAVGACIPSC 360
  361 TGDGCGGVQV SYYCGSGYTC TTGNICCPIN SCPNGGEVLG PTINGLCPTG YTVQGNLCCS 420
  421 ATCTDGSTGL PSVNGVCIDG YSLTNGVCCP ASVTCTDEIS IGPCTGTGFN GGCPAGYACD 480
  481 SNQVNCCPVV RYTDESCQVG PAIDGLCPPG YVVVYIPNSP LITNGVNPGT CIDLQCTTGL 540
  541 CLTANQIGDC DTATDAGTCP TGYTCFTNAG ICCSTTTFSR LRIGNSRQMA QKPNYGRPLH 600
  601 SYMPPRFGGP SSSCSDGSLS SGPCMNGLCG IGLECQNGKC CSPSSNKPAG LLQSKCPSGD 660
  661 TAVSGCFPNG SCGTGYECVS SLNLCCPPGQ PQTFPSFPGN NNGFNINNNN RFGSLSMSPR 720
  721 PIGARCQLDG ECVGQAEGLS MCHAGVCQCS PIAYTQGIAC VRRKSFQMND DPVIDAANDD 780
  781 KSSSSVSV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] PSI-BLAST 13.69897 NMR structure of the human NOTCH-1 ligand binding region
    2 View Details [145..337] FFAS03 1.37 A PREORGANIZED ACTIVE SITE IN THE CRYSTAL STRUCTURE OF THE TETRAHYMENA RIBOZYME
    3 View Details [338..725] PSI-BLAST 8.221849 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor
    4 View Details [726..788] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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