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Protein Overview: CE37226

General Information:
Name(s) found: CE37226 [WormBase]
Description(s) found:
Found 14 descriptions.
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  • WBGene00017929 locus:grld-1 status:Partially_confirmed UniProt:H2KYB9 protein_id:CCD62182.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 497 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEALink to PubMed article]
    Biological Process: mRNA processing [IEALink to PubMed article]
    regulation of transcription [IEALink to PubMed article]
    Molecular Function: nucleic acid binding [IEALink to PubMed article]
    RNA binding [IEALink to PubMed article]
    binding [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEERGRPQY RPNCNGLSSY YRERFGSHSP EVYLNLRISG FDDRLEREQI KQYLTQELKK  60
   61 YAPFEIKVVR YTLMDRLKSV LGKRVQCDPA GILRDQEGKY IPDRFNRAQH GADSKREGGS 120
  121 GSGNRGRPTK EPSTWRLKQD DDEATRTLFV GNMPSDVKER EIRHVFEEHG KVEEVDIKTP 180
  181 INTDAAYAFV MFQTVDQAIQ AKAEEQDRPI RAGGSRMKIG YGKSQVSRRL FVGGLGSWCD 240
  241 KEILQKAFGE FGFVENIDYD HGQPYAYVVY ENTHTSQEAC RSLRGACISK GNHPIMVDYA 300
  301 KDLTAQPEKQ QFMRKRRASK SPVGASAVRT PPGSPKDVVR NFAELEEAYA ATWSGKMALK 360
  361 KTDYPVKFYR VYGAERLPVK LLRDEDDVPL RLLITQRLSL SSQNLLFDKL ASCSSKELSL 420
  421 GVITGKKELS DLQPLVNYFT NKEAAGVVTV PGGILYIFPF CEFALKLLAE FTPQVNVFNE 480
  481 NCPFLLGALA VRAPGTP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..221] PSI-BLAST 20.30103 Nucleolin
    2 View Details [222..318] PSI-BLAST 34.154902 Nuclear ribonucleoprotein A1 (RNP A1, UP1)
    3 View Details [319..497] PSI-BLAST 13.69897 Crystal structure of the SPOC domain of the human transcriptional corepressor, SHARP.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle