| Protein: | CE37226 |
| Organism: | Caenorhabditis elegans |
| Length: | 497 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CE37226.
| Description | E-value | Query Range |
Subject Range |
|
|
357.0 | [0..4] | [496..77] |
|
Region A: Residues: [1-221] |
1 11 21 31 41 51
| | | | | |
1 MAEERGRPQY RPNCNGLSSY YRERFGSHSP EVYLNLRISG FDDRLEREQI KQYLTQELKK 60
61 YAPFEIKVVR YTLMDRLKSV LGKRVQCDPA GILRDQEGKY IPDRFNRAQH GADSKREGGS 120
121 GSGNRGRPTK EPSTWRLKQD DDEATRTLFV GNMPSDVKER EIRHVFEEHG KVEEVDIKTP 180
181 INTDAAYAFV MFQTVDQAIQ AKAEEQDRPI RAGGSRMKIG Y
|
| Detection Method: |  |
| Confidence: | 20.30103 |
| Match: | 1fjeB |
| Description: | Nucleolin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| binding | 0.950788308762215 | bayes_pls_golite062009 |
| nucleic acid binding | 0.29562225149076 | bayes_pls_golite062009 |
|
Region A: Residues: [222-318] |
1 11 21 31 41 51
| | | | | |
1 GKSQVSRRLF VGGLGSWCDK EILQKAFGEF GFVENIDYDH GQPYAYVVYE NTHTSQEACR 60
61 SLRGACISKG NHPIMVDYAK DLTAQPEKQQ FMRKRRA
|
| Detection Method: | |
| Confidence: | 34.154902 |
| Match: | 1l3kA |
| Description: | Nuclear ribonucleoprotein A1 (RNP A1, UP1) |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [319-497] |
1 11 21 31 41 51
| | | | | |
1 SKSPVGASAV RTPPGSPKDV VRNFAELEEA YAATWSGKMA LKKTDYPVKF YRVYGAERLP 60
61 VKLLRDEDDV PLRLLITQRL SLSSQNLLFD KLASCSSKEL SLGVITGKKE LSDLQPLVNY 120
121 FTNKEAAGVV TVPGGILYIF PFCEFALKLL AEFTPQVNVF NENCPFLLGA LAVRAPGTP
|
| Detection Method: | |
| Confidence: | 13.69897 |
| Match: | 1ow1A |
| Description: | Crystal structure of the SPOC domain of the human transcriptional corepressor, SHARP. |
Matching Structure (courtesy of the PDB): |
|
