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Protein Overview: prx-5

General Information:
Name(s) found: prx-5 / CE36377 [WormBase]
Description(s) found:
Found 13 descriptions.
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  • WBGene00004194 locus:prx-5 status:Confirmed UniProt:Q7JM90 protein_id:CAF31472.1 [WormBase]
    • Organism: Caenorhabditis elegans
    Length: 500 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein import into peroxisome matrix [IMPLink to PubMed article]
    nematode larval development [IMPLink to PubMed articleLink to PubMed articleLink to PubMed articleLink to PubMed article]
    positive regulation of growth rate [IMPLink to PubMed article]
    embryonic development ending in birth or egg hatching [IMPLink to PubMed article]
    response to stress [IEALink to PubMed article]
    growth [IMPLink to PubMed articleLink to PubMed article]
    Molecular Function: peroxisome matrix targeting signal-1 binding [IDALink to PubMed articleLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGVVEGQCG QQNALVGLAN TFGTSNQRVA PSNASLLPSS SMGEQMANEF LRQQARTMAP  60
   61 TSFSMKSMQN NLPQASASSS LAANWTKEFQ PRQNQLASQW SQQYTSSAPS MESAWRQVQA 120
  121 PSMTSTSSHQ PITDAGMWSS EYLDTVDTSL TKSSGTQNWA DDFMEQQDNY GMENTWKDAQ 180
  181 AFEQRWEEIK RDMEKDESLQ SPENYVYQEA NPFTTMSDPL MEGDNLMRNG DIGNAMLAYE 240
  241 AAVQKDPQDA RAWCKLGLAH AENEKDQLAM QAFQKCLQID AGNKEALLGL SVSQANEGME 300
  301 NEALHQLDKW MSSYLGSNST QVTTTPPLYS SFLDSDTFNR VEARFLDAAR QQGATPDPDL 360
  361 QNALGVLYNL NRNFARAVDS LKLAISKNPT DARLWNRLGA TLANGDHTAE AISAYREALK 420
  421 LYPTYVRARY NLGISCMQLS SYDEALKHFL SALELQKGGN DASGIWTTMR SAAIRTSNVP 480
  481 DNLLRAVERR DLAAVKASLV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..77] deduced N/A No confident structure predictions are available.
    2 View Details [78..161] PSI-BLAST 22.0 No description for 2q7fA was found.
    3 View Details [162..500] PSI-BLAST 29.39794 Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3
    Term Confidence Notes
  • peroxisome targeting sequence binding
    		•  6.28836842401449 bayes_pls_golite062009
  • peroxisome matrix targeting signal-1 binding
    		•  5.30441166392789 bayes_pls_golite062009
  • binding
    		•  2.09193012129784 bayes_pls_golite062009
  • protein binding
    		•  1.52807685989528 bayes_pls_golite062009
  • signal sequence binding
    		•  1.13935627118933 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle