| Protein: | prx-5 |
| Organism: | Caenorhabditis elegans |
| Length: | 500 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for prx-5.
| Description | E-value | Query Range |
Subject Range |
|
|
311.0 | [0..7] | [489..154] |
|
Region A: Residues: [1-77] |
1 11 21 31 41 51
| | | | | |
1 MKGVVEGQCG QQNALVGLAN TFGTSNQRVA PSNASLLPSS SMGEQMANEF LRQQARTMAP 60
61 TSFSMKSMQN NLPQASA
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [78-161] |
1 11 21 31 41 51
| | | | | |
1 SSSLAANWTK EFQPRQNQLA SQWSQQYTSS APSMESAWRQ VQAPSMTSTS SHQPITDAGM 60
61 WSSEYLDTVD TSLTKSSGTQ NWAD
|
| Detection Method: | |
| Confidence: | 22.0 |
| Match: | 2q7fA |
| Description: | No description for 2q7fA was found. |
|
Region A: Residues: [162-500] |
1 11 21 31 41 51
| | | | | |
1 DFMEQQDNYG MENTWKDAQA FEQRWEEIKR DMEKDESLQS PENYVYQEAN PFTTMSDPLM 60
61 EGDNLMRNGD IGNAMLAYEA AVQKDPQDAR AWCKLGLAHA ENEKDQLAMQ AFQKCLQIDA 120
121 GNKEALLGLS VSQANEGMEN EALHQLDKWM SSYLGSNSTQ VTTTPPLYSS FLDSDTFNRV 180
181 EARFLDAARQ QGATPDPDLQ NALGVLYNLN RNFARAVDSL KLAISKNPTD ARLWNRLGAT 240
241 LANGDHTAEA ISAYREALKL YPTYVRARYN LGISCMQLSS YDEALKHFLS ALELQKGGND 300
301 ASGIWTTMRS AAIRTSNVPD NLLRAVERRD LAAVKASLV
|
| Detection Method: | |
| Confidence: | 29.39794 |
| Match: | 1fchA |
| Description: | Peroxin pex5 (peroxisomal targeting signal 1 (PTS1) receptor) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peroxisome targeting sequence binding | 6.28836842401449 | bayes_pls_golite062009 |
| peroxisome matrix targeting signal-1 binding | 5.30441166392789 | bayes_pls_golite062009 |
| binding | 2.09193012129784 | bayes_pls_golite062009 |
| protein binding | 1.52807685989528 | bayes_pls_golite062009 |
| signal sequence binding | 1.13935627118933 | bayes_pls_golite062009 |
