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Protein Overview: CE36979

General Information:
Name(s) found: CE36979 [WormBase]
Description(s) found:
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  • WBGene00015815 status:Confirmed UniProt:Q6A578 protein_id:CCD62419.1 [WormBase]
  • gi|71981905|ref|NP_001021960.1| hypothetical protein C16A11.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|50727073|gb|AAT81208.1| Hypothetical protein C16A11.2b [Caenorhabditis elegans] [NCBI NR]
  • Hypothetical protein C16A11.2b [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36979 WBGene00015815 status:Partially_confirmed TR:Q6A578 protein_id:AAT81208.1 [wormpep150.fasta]
  • 36979 WBGene00015815 status:Partially_confirmed protein_id:AAT81208.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • 36979 WBGene00015815 status:Partially_confirmed TR:Q6A578 protein_id:AAT81208.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE36979 WBGene00015815 status:Partially_confirmed UniProt:Q6A578_CAEEL protein_id:AAT81208.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36979 WBGene00015815 status:Partially_confirmed UniProt:Q6A578_CAEEL protein_id:AAT81208.1| [wormORF-contam.fasta]
  • C16A11.2b [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE36979 WBGene00015815 status:Partially_confirmed UniProt:Q6A578 protein_id:AAT81208.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36979 WBGene00015815 status:Confirmed UniProt:Q6A578 protein_id:CCD62419.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Isoform of H2KYD0, Uncharacterized protein OS=Caenorhabditis elegans GN=C16A11.2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 431 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: translational termination [IEALink to PubMed article]
    Molecular Function: translation release factor activity, codon specific [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHEHRDEAL KDFRHHLRRG VTTTRYMKRF DNSAMFNLSM DAKCTLAEYV VYSRTGDRLV  60
   61 GFTDETEETD NLKEASTKKH VPTTTVRKMM DEAVVETFKN DTESIKTSRE GMCKEVDELN 120
  121 IPQRLEALES LVIDEAELFQ QVKDTHKQLS DRYNTIKNRV VSNDQMFTFY NSNSDLDQLA 180
  181 EIVKFFEVTQ ARADELRACA ECDVRMAQNH ENLLRQNRDK NGKMQKYCVK QREIVDDWAE 240
  241 RMKMVYVTCR DVVALQFRLD RYLKTLISHY RKRHMEKLLE SSELTQEAKT NVIDHNVTID 300
  301 ILTFSAKIKG FMDEVEKSLV VEPASQEYRD AFVSYMNDVR TQLGEYHWKA KLTQDKTLAE 360
  361 KDTLAALRTR IRQKEREVSN TSDEMKRMLK IYESLKEVDS LLAQREEISP AFQYALDSRE 420
  421 AEEEDEEAEE S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..431] FFAS03 1.13 The modeled structure of fibritin (gpwac) of bacteriophage T4 based on cryo-EM reconstruction of the extended tail of bacteriophage T4


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle