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Protein Overview: CE36978

General Information:
Name(s) found: CE36978 [WormBase]
Description(s) found:
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  • WBGene00015815 status:Confirmed UniProt:H2KYD0 protein_id:CCD62418.1 [WormBase]
  • gi|71981900|ref|NP_001021959.1| hypothetical protein C16A11.2 [Caenorhabditis elegans] [NCBI NR]
  • gi|50727072|gb|AAT81207.1| Hypothetical protein C16A11.2a [Caenorhabditis elegans] [NCBI NR]
  • Hypothetical protein C16A11.2a [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36978 WBGene00015815 status:Partially_confirmed TR:Q6A579 protein_id:AAT81207.1 [wormpep150.fasta]
  • 36978 WBGene00015815 status:Partially_confirmed protein_id:AAT81207.1 [wormpep130-phg-ecoli-orf-rand.fasta]
  • 36978 WBGene00015815 status:Partially_confirmed TR:Q6A579 protein_id:AAT81207.1 [wormpep150-phg-orf-ecoli-rand.fasta]
  • CE36978 WBGene00015815 status:Partially_confirmed UniProt:Q6A579_CAEEL protein_id:AAT81207.1 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36978 WBGene00015815 status:Partially_confirmed UniProt:Q6A579_CAEEL protein_id:AAT81207.1| [wormORF-contam.fasta]
  • C16A11.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE36978 WBGene00015815 status:Partially_confirmed UniProt:Q6A579 protein_id:AAT81207.1 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36978 WBGene00015815 status:Confirmed UniProt:H2KYD0 protein_id:CCD62418.1 [wormbase_c_elegans_ws231_03-13-2012_reversed.fasta]
  • Uncharacterized protein OS=Caenorhabditis elegans GN=C16A11.2 PE=1 SV=1 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 570 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IEALink to PubMed article]
    Biological Process: translational termination [IEALink to PubMed article]
    Molecular Function: translation release factor activity, codon specific [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDLNAAAAEK PETSSNCRND IIAMLSASGY HRARVSCLND YDKIVGGIVW AIMRCDDVDV  60
   61 AVDLLYEESE DQNIKLRTEQ SEKLIEALKA VQCPHEIATH QISGLDFLAL KNVIQWLLRH 120
  121 VLAQESKGNK FKHFTEWFSM HHEHRDEALK DFRHHLRRGV TTTRYMKRFD NSAMFNLSMD 180
  181 AKCTLAEYVV YSRTGDRLVG FTDETEETDN LKEASTKKHV PTTTVRKMMD EAVVETFKND 240
  241 TESIKTSREG MCKEVDELNI PQRLEALESL VIDEAELFQQ VKDTHKQLSD RYNTIKNRVV 300
  301 SNDQMFTFYN SNSDLDQLAE IVKFFEVTQA RADELRACAE CDVRMAQNHE NLLRQNRDKN 360
  361 GKMQKYCVKQ REIVDDWAER MKMVYVTCRD VVALQFRLDR YLKTLISHYR KRHMEKLLES 420
  421 SELTQEAKTN VIDHNVTIDI LTFSAKIKGF MDEVEKSLVV EPASQEYRDA FVSYMNDVRT 480
  481 QLGEYHWKAK LTQDKTLAEK DTLAALRTRI RQKEREVSNT SDEMKRMLKI YESLKEVDSL 540
  541 LAQREEISPA FQYALDSREA EEEDEEAEES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..393] PSI-BLAST 22.69897 Heavy meromyosin subfragment
    2 View Details [394..570] PSI-BLAST 7.39794 Tropomyosin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle