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Protein Overview: twk-5

General Information:
Name(s) found: twk-5 / CE36421 [WormBase]
Description(s) found:
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  • WBGene00006660 locus:twk-5 status:Partially_confirmed UniProt:Q17481 protein_id:CAA91376.2 [WormBase]
  • gi|71980689|ref|NP_001021895.1| TWiK family of potassium channels family member (twk-5) [Caenorhabditis elegans] [NCBI NR]
  • gi|50507717|emb|CAA91376.2| C. elegans protein B0334.2a, partially confirmed by transcript evidence [Caenorhabditis elegans] [NCBI NR]
  • Hypothetical protein B0334.2 [Caenorhabditis elegans] [nrdb_11152004_Chlamydomonas]
  • CE36421 WBGene00006660 locus:twk-5 potassium channel protein status:Partially_confirmed TR:Q17481 protein_id:CAA91376.2 [wormpep150.fasta]
  • 36421 WBGene00006660 locus:twk-5 potassium channel protein status:Partially_confirmed TR:Q17481 protein_id:CAA91376.2 [wormpep130-phg-ecoli-orf-rand.fasta]
  • CE36421 WBGene00006660 locus:twk-5 potassium channel protein status:Partially_confirmed UniProt:Q17481_CAEEL protein_id:CAA91376.2 [WormBase_C-elegans_193_07-31-2008_con_reversed.fasta]
  • CE36421 WBGene00006660 locus:twk-5 potassium channel protein status:Partially_confirmed UniProt:Q17481_CAEEL protein_id:CAA91376.2| [wormORF-contam.fasta]
  • TWiK family of potassium channels family member (twk-5) [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • Hypothetical protein B0334.2a [Caenorhabditis elegans] [nr-271106-contam.fasta]
  • CE36421 WBGene00006660 locus:twk-5 potassium channel protein status:Partially_confirmed UniProt:Q17481 protein_id:CAA91376.2 [wormbase_c-elegans_2.11_01-10-2010_reversed.fasta]
  • [wormpep210-phg-orf-LaDeana-ecoli-contam.fasta.nr]
  • CE36421 WBGene00006660 locus:twk-5 status:Partially_confirmed UniProt:Q17481 protein_id:CAA91376.2 [wormpep246-ecoli-contam.fasta]
  • TWiK family of potassium channels OS=Caenorhabditis elegans GN=twk-5 PE=3 SV=2 [CAEEL.fasta.20160308]
    • Organism: Caenorhabditis elegans
    Length: 288 amino acids

    Gene Ontology:
    Cellular Component: membrane [IEALink to PubMed article]
    integral to membrane [IEALink to PubMed article]
    Biological Process: potassium ion transport [IEALink to PubMed article]
    Molecular Function: potassium channel activity [IEALink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLETRCRLH LWPSGKLLRR IAPQAIIVLI LTTLMLVGAA IFQSIDPVLG EQSFYEVVFF  60
   61 EFITISTIGY GNQYPQTHAS RVFSIFFSIL GIPLLVVTLG NFGKYLTKFY WKTHGWIFSE 120
  121 RTESELVNDK DMPGIVIACL YLLTFAIGFF FIPHSGAAYS IDDCYFSFIS FATVGFGDKV 180
  181 PQIDTFEKFC KVITYLVWGT ILNIMLISYV TNWFTQLFAR QPFRGTDVEV MIGGQCITVS 240
  241 EITSLVAKEF HASPHQVRSI LHDINGIMED MKTEEDSEKS DILVAQDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..288] PSI-BLAST 26.522879 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle