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Protein Overview: YGR296C-B, YER19...

General Information:
Name(s) found: YPR204C-A [SGD]
YPL283W-B [SGD]
YGR296C-B [SGD]
YER190C-B [SGD]
Description(s) found:
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  • gi|74622194|sp|Q8TFA4.1|YE190_YEAST RecName: Full=UPF0479 membrane protein YER190C-B/YEL077W-A/YGR296C-B/YPL283W-B/YPR204C-A [NCBI NR]
  • gi|18767238|gb|AAL79334.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • gi|18767236|gb|AAL79333.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • gi|18767182|gb|AAL79306.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • gi|18767180|gb|AAL79305.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • gi|18767178|gb|AAL79304.1| unknown [Saccharomyces cerevisiae] [NCBI NR]
  • gi|119524037|ref|NP_001073292.1| Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; Yer190c-bp [Saccharomyces cerevisiae] [NCBI NR]
  • UPF0479 membrane protein YER190C-B/YEL077W-A/YGR296C-B/YPL283W-B/YPR204C-A OS=Saccharomyces cerevisiae GN=YER190C-B PE=2 SV=1 [Swiss-Prot]
  • Conserved hypothetical protein - identified by homology [mips]
  • Questionable protein - identified by homology [mips]
  • [DUBIOUS] Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [SGD]
  • [DUBIOUS] Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; contained completely within TEL07R [SGD]
  • Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching [SGD]
  • unknown [Saccharomyces cerevisiae]gi|18767236|gb|AAL79333.1| unknown [Saccharomyces cerevisiae]gi|18767182|gb|AAL79306.1| unknown [Saccharomyces cerevisiae]gi|18767180|gb|AAL79305.1| unknown [Saccharomyces cerevisiae]gi|18767178|gb|AAL79304.1| unknown [nrdb_11152004_Chlamydomonas]
  • YPR204C-A SGDID:S0028727, Chr XVI from 947332-946850, reverse complement, Dubious ORF [yeastflysequest.fasta]
  • YPL283W-B SGDID:S0028724, Chr XVI from 643-1125, Dubious ORF [yeastflysequest.fasta]
  • YGR296C-B SGDID:S0028643, Chr VII from 1090233-1089751, reverse complement, Dubious ORF [yeastflysequest.fasta]
  • YER190C-B SGDID:S0028627, Chr V from 576157-575675, reverse complement, Dubious ORF [yeastflysequest.fasta]
  • YPR204C-A SGDID:S0028727, Chr XVI from 947334-946852, reverse complement, Dubious ORF [10112005cervSGD.fasta]
  • YGR296C-B SGDID:S0028643, Chr VII from 1090234-1089752, reverse complement, Dubious ORF [10112005cervSGD.fasta]
  • YER190C-B SGDID:S000028627, Chr V from 576157-575675, reverse complement, Dubious ORF, "Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [yeast-contam.fasta]
  • YGR296C-B SGDID:S000028643, Chr VII from 1090234-1089752, reverse complement, Dubious ORF, "Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; contained completely within TEL07R" [yeast-contam.fasta]
  • YPL283W-B SGDID:S000028724, Chr XVI from 643-1125, Dubious ORF, "Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [yeast-contam.fasta]
  • YPR204C-A SGDID:S000028727, Chr XVI from 947334-946852, reverse complement, Dubious ORF, "Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [yeast-contam.fasta]
  • YER190C-B SGDID:S000028627, Chr V from 576157-575675, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • YGR296C-B SGDID:S000028643, Chr VII from 1090235-1089753, reverse complement, Dubious ORF, "Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; contained completely within TEL07R" [SGD_S-cerevisiae_na_08-19-2008_con_reversed.fasta]
  • unknown [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • UPF0479 membrane protein YER190C-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER190C-B PE=2 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YER190C-B SGDID:S000028627, Chr V from 576162-575680, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [yeast-030211-contam.fasta]
  • YGR296C-B SGDID:S000028643, Chr VII from 1090228-1089746, Genome Release 64-1-1, reverse complement, Dubious ORF, "Dubious open reading frame unlikely to encode a protein, based on available experimental and comparative sequence data; contained completely within TEL07R" [yeast-030211-contam.fasta]
  • YPL283W-B SGDID:S000028724, Chr XVI from 643-1125, Genome Release 64-1-1, Dubious ORF, "Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [yeast-030211-contam.fasta]
  • YPR204C-A SGDID:S000028727, Chr XVI from 947338-946856, Genome Release 64-1-1, reverse complement, Dubious ORF, "Identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [yeast-030211-contam.fasta]
  • YER190C-B SGDID:S000028627, Chr V from 576162-575680, Genome Release 64-2-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching" [20141208_orf_trans.fasta]
  • UPF0479 membrane protein YER190C-B OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YER190C-B PE=3 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Saccharomyces cerevisiae
    Length: 160 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMPAKLQLDV LRTLQSSARH GTQTLKNSNF LERFHKDRIV FCLPFFPALF FVPVQKVLQH  60
   61 LCLRFTQVAP YFIIQLFDLP SRHAENLAPL LASCRIQYTN CFSSSSNGQV PSIISLYLRV 120
  121 DLSPFYAKIF QISYRVPMIW LDVFQVFFVF LVISQHSLHS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..160] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle