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Protein Overview: AB40G_ARATH

General Information:
Name(s) found: AB40G_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|8072390|gb|AAF71978.1|AC013453_3 Putative ABC transporter [Arabidopsis thaliana] [NCBI NR]
  • gi|75336094|sp|Q9M9E1.1|AB40G_ARATH RecName: Full=ABC transporter G family member 40; Short=ABC transporter ABCG.40; Short=AtABCG40; AltName: Full=Pleiotropic drug resistance protein 12 [NCBI NR]
  • gi|28144321|tpg|DAA00880.1| TPA_exp: PDR12 ABC transporter [Arabidopsis thaliana] [NCBI NR]
  • pir||A86289 probable ABC transporter [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218218|ref|NP_173005.1| PDR12 (PLEIOTROPIC DRUG RESISTANCE 12); ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] [NCBI NR]
  • Pleiotropic drug resistance protein 12 OS=Arabidopsis thaliana GN=PDR12 PE=2 SV=1 [Swiss-Prot]
  • ABC transporter G family member 40 OS=Arabidopsis thaliana GN=ABCG40 PE=1 SV=1 [Swiss-Prot]
  • (Q9M9E1) Putative ABC transporter (PDR12 ABC transporter) [athaliana3702.FASTAC.txt]
  • TPA: PDR12 ABC transporter [Arabidopsis thaliana]gi|8072390|gb|AAF71978.1| Putative ABC transporter [Arabidopsis thaliana]gi|25384578|pir||A86289 probable ABC transporter [imported] - Arabidopsis thalianagi|15218218|ref|NP_173005.1| ABC transporter fam [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 ABC transporter family involved in resistant to lead [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: PDR12, ATPDR12 | ATPDR12/PDR12 (PLEIOTROPIC DRUG RESISTANCE 12); ATPase, coupled to transmembrane movement of substances | chr1:5331988-5338170 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Putative ABC transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Pleiotropic drug resistance protein 12 [nr-271106-contam.fasta]
  • PDR12; ATPase, coupled to transmembrane movement of substances [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • TPA_exp: PDR12 ABC transporter [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: PDR12, ATPDR12, ABCG40, ATABCG40 | pleiotropic drug resistance 12 | chr1:5331993-5338175 REVERSE LENGTH=1423 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 1423 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA][IEP]
    Biological Process: response to biotic stimulus [TAS]
    drug transmembrane transport [ISS]
    lead ion transport [IMP]
    response to ozone [IEP]
    response to jasmonic acid stimulus [TAS]
    terpenoid transport [IDA]
    response to salicylic acid stimulus [TAS]
    response to ethylene stimulus [TAS]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEGTSFHQAS NSMRRNSSVW KKDSGREIFS RSSREEDDEE ALRWAALEKL PTFDRLRKGI  60
   61 LTASHAGGPI NEIDIQKLGF QDTKKLLERL IKVGDDEHEK LLWKLKKRID RVGIDLPTIE 120
  121 VRFDHLKVEA EVHVGGRALP TFVNFISNFA DKFLNTLHLV PNRKKKFTIL NDVSGIVKPG 180
  181 RMALLLGPPS SGKTTLLLAL AGKLDQELKQ TGRVTYNGHG MNEFVPQRTA AYIGQNDVHI 240
  241 GEMTVRETFA YAARFQGVGS RYDMLTELAR REKEANIKPD PDIDIFMKAM STAGEKTNVM 300
  301 TDYILKILGL EVCADTMVGD DMLRGISGGQ KKRVTTGEML VGPSRALFMD EISTGLDSST 360
  361 TYQIVNSLRN YVHIFNGTAL ISLLQPAPET FNLFDDIILI AEGEIIYEGP RDHVVEFFET 420
  421 MGFKCPPRKG VADFLQEVTS KKDQMQYWAR RDEPYRFIRV REFAEAFQSF HVGRRIGDEL 480
  481 ALPFDKTKSH PAALTTKKYG VGIKELVKTS FSREYLLMKR NSFVYYFKFG QLLVMAFLTM 540
  541 TLFFRTEMQK KTEVDGSLYT GALFFILMML MFNGMSELSM TIAKLPVFYK QRDLLFYPAW 600
  601 VYSLPPWLLK IPISFMEAAL TTFITYYVIG FDPNVGRLFK QYILLVLMNQ MASALFKMVA 660
  661 ALGRNMIVAN TFGAFAMLVF FALGGVVLSR DDIKKWWIWG YWISPIMYGQ NAILANEFFG 720
  721 HSWSRAVENS SETLGVTFLK SRGFLPHAYW YWIGTGALLG FVVLFNFGFT LALTFLNSLG 780
  781 KPQAVIAEEP ASDETELQSA RSEGVVEAGA NKKRGMVLPF EPHSITFDNV VYSVDMPQEM 840
  841 IEQGTQEDRL VLLKGVNGAF RPGVLTALMG VSGAGKTTLM DVLAGRKTGG YIDGNITISG 900
  901 YPKNQQTFAR ISGYCEQTDI HSPHVTVYES LVYSAWLRLP KEVDKNKRKI FIEEVMELVE 960
  961 LTPLRQALVG LPGESGLSTE QRKRLTIAVE LVANPSIIFM DEPTSGLDAR AAAIVMRTVR1020
 1021 NTVDTGRTVV CTIHQPSIDI FEAFDELFLL KRGGEEIYVG PLGHESTHLI NYFESIQGIN1080
 1081 KITEGYNPAT WMLEVSTTSQ EAALGVDFAQ VYKNSELYKR NKELIKELSQ PAPGSKDLYF1140
 1141 PTQYSQSFLT QCMASLWKQH WSYWRNPPYT AVRFLFTIGI ALMFGTMFWD LGGKTKTRQD1200
 1201 LSNAMGSMYT AVLFLGLQNA ASVQPVVNVE RTVFYREQAA GMYSAMPYAF AQVFIEIPYV1260
 1261 LVQAIVYGLI VYAMIGFEWT AVKFFWYLFF MYGSFLTFTF YGMMAVAMTP NHHIASVVSS1320
 1321 AFYGIWNLFS GFLIPRPSMP VWWEWYYWLC PVAWTLYGLI ASQFGDITEP MADSNMSVKQ1380
 1381 FIREFYGYRE GFLGVVAAMN VIFPLLFAVI FAIGIKSFNF QKR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..82] deduced N/A No confident structure predictions are available.
    2 View Details [83..427] PSI-BLAST 42.0 No description for 2cbzA was found.
    3 View Details [428..518] deduced N/A No confident structure predictions are available.
    4 View Details [519..1084] PSI-BLAST 86.522879 No description for 2hydA was found.
    5 View Details [1085..1143] PSI-BLAST 62.221849 Crystal structure of E. coli MalK in the nucleotide-free form
    6 View Details [1144..1334] MSA 2.305992 View MSA. No confident structure predictions are available.
    7 View Details [1335..1423] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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