YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CCD7_ARATH

General Information:
Name(s) found: CCD7_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • Carotenoid cleavage dioxygenase 7, chloroplastic OS=Arabidopsis thaliana GN=CCD7 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 618 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    plastid [IDA]
    Biological Process: auxin polar transport [IMP]
    carotene catabolic process [IDA]
    xanthophyll catabolic process [IDA]
    secondary shoot formation [IGI]
    Molecular Function: 9-cis-epoxycarotenoid dioxygenase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLPIPPKFL PPLKSPPIHH HQTPPPLAPP RAAISISIPD TGLGRTGTIL DESTSSAFRD  60
   61 YQSLFVSQRS ETIEPVVIKP IEGSIPVNFP SGTYYLAGPG LFTDDHGSTV HPLDGHGYLR 120
  121 AFHIDGNKRK ATFTAKYVKT EAKKEEHDPV TDTWRFTHRG PFSVLKGGKR FGNTKVMKNV 180
  181 ANTSVLKWAG RLLCLWEGGE PYEIESGSLD TVGRFNVENN GCESCDDDDS SDRDLSGHDI 240
  241 WDTAADLLKP ILQGVFKMPP KRFLSHYKVD GRRKRLLTVT CNAEDMLLPR SNFTFCEYDS 300
  301 EFKLIQTKEF KIDDHMMIHD WAFTDTHYIL FANRVKLNPI GSIAAMCGMS PMVSALSLNP 360
  361 SNESSPIYIL PRFSDKYSRG GRDWRVPVEV SSQLWLIHSG NAYETREDNG DLKIQIQASA 420
  421 CSYRWFDFQK MFGYDWQSNK LDPSVMNLNR GDDKLLPHLV KVSMTLDSTG NCNSCDVEPL 480
  481 NGWNKPSDFP VINSSWSGKK NKYMYSAASS GTRSELPHFP FDMVVKFDLD SNLVRTWSTG 540
  541 ARRFVGEPMF VPKNSVEEGE EEDDGYIVVV EYAVSVERCY LVILDAKKIG ESDAVVSRLE 600
  601 VPRNLTFPMG FHGLWASD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..618] PSI-BLAST 109.0 Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.90

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle