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Protein Overview: RH17_ARATH

General Information:
Name(s) found: RH17_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 17 OS=Arabidopsis thaliana GN=RH17 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 609 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRAQQSARE TKQEAKDASK AKSGLFASCS FSSLGLDTKL SDQLKERMGF EAPTLVQAQA  60
   61 IPVILSGRDV LVNAPTGTGK TIAYLAPLIH HLQGHSPKVD RSHGTFALVI VPTRELCLQV 120
  121 YETLEKLLHR FHWIVPGYVM GGEKKAKEKA RLRKGISILI ATPGRLLDHL KNTASFVHKN 180
  181 LRWVIFDEAD SILELGYGKE IEQIIKLLGS GQNEQGEEDD IVPKGIQKQN LLLSATLNDK 240
  241 VNDLAKLSLD DPVMIGLDNT KLQQNLSIES PAAPDSDAED MVIHVNKSAN PLSEDYGIPS 300
  301 QLVQRYLRVP CGARLVALLS VLKNLFEREA SQKVVVFFST RDAVDFHYSL LSEFQWPPNS 360
  361 ETEEEGTKEL FLKCKTFRLH GSMEQEDRRS AFGTFKTEKQ AVLLSTDVAA RGLDFPKVRC 420
  421 IIQYDCPGEA TEYVHRVGRT ARIGEKGEAL LFLQPIEIDY LKELKKHGAS LTEYPLMKVL 480
  481 DKFPIPGNMP RIKKVLSLES HPWVISLQRA LESLTYAEPK MKSLAKNAFV SWVRGYAAHK 540
  541 GELKSIFVVK KLHLGHVAKS FALREQPSLV GKSHHKETMK RKRDERQKGQ QGKKRKKMSG 600
  601 TGNRSTQKT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..484] PSI-BLAST 86.30103 No description for 2db3A was found.
    2 View Details [485..609] PSI-BLAST 26.0 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle