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Protein Overview: gi|15220119, gi|...

General Information:
Name(s) found: gi|31711874 [NCBI NR]
gi|25406657 [NCBI NR]
gi|20260520 [NCBI NR]
gi|15220119 [NCBI NR]
gi|12324981 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • gi|31711874|gb|AAP68293.1| At1g80360 [Arabidopsis thaliana] [NCBI NR]
  • pir||C96835 hypothetical protein F5I6.11 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20260520|gb|AAM13158.1| putative aspartate aminotransferase [Arabidopsis thaliana] [NCBI NR]
  • gi|15220119|ref|NP_178152.1| aminotransferase class I and II family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324981|gb|AAG52437.1|AC018848_8 putative aspartate aminotransferase; 38163-36256 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 394 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biosynthetic process [IEA]
    Molecular Function: pyridoxal phosphate binding [IEA]
    transferase activity, transferring nitrogenous groups [IEA]
    catalytic activity [IEA]
    transaminase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSFGMLSRR TLGTDMPVMA QIRSLMAELT NPMSLAQGVV HWQPPQKALE KVKELVWDPI  60
   61 ISSYGPDEGL PELRQALLKK LREENKLTNS QVMVTAGANQ AFVNLVITLC DAGDSVVMFE 120
  121 PYYFNSYMAF QMTGVTNIIV GPGQSDTLYP DADWLERTLS ESKPTPKVVT VVNPGNPSGT 180
  181 YVPEPLLKRI AQICKDAGCW LIVDNTYEYF MYDGLKHCCV EGDHIVNVFS FSKTYGMMGW 240
  241 RLGYIAYSER LDGFATELVK IQDNIPICAA IISQRLAVYA LEEGSGWITE RVKSLVKNRD 300
  301 IVKEALEPLG KENVKGGEGA IYLWAKLPEG HRDDFKVVRW LAHRHGVVVI PGCASGSPGY 360
  361 LRVSFGGLQE VEMRAAAARL RKGIEELLHH GMVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..394] PSI-BLAST 97.0 Aspartate aminotransferase, AAT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  5.51961002550688 bayes_pls_golite062009
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.63055151623667 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.63055151623667 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • 4-aminobutyrate transaminase activity
    		•  0.99097016439114 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009
  • cystathionine beta-lyase activity
    		•  0.0833010353195099 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.013097682076602 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.87

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle