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Protein Overview: ATL5_ARATH

General Information:
Name(s) found: ATL5_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    Biological Process: protein complex assembly [TAS]
    Molecular Function: zinc ion binding [ISS]
    protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNLFDSSKT LWGNMNHGSS RYSLNGKIML ASVIILFVAV ILILCFHSYA RWLFRRQNRR  60
   61 IRRRISAHLR SLAAARDPTQ SSSSLSPLDP TVLEKIPIFV YSVKTHESPL EECSVCLSEF 120
  121 EEDDEGRVLP KCGHVFHVDC IDTWFRSRSS CPLCRAPVQP AQPVTEPEPV AAVFPSVKPI 180
  181 EDTEAGSSSS SDESESSTPS SSSGSPVRFP MEACEREPID LVGIIVEIPR EFQDSNSDLP 240
  241 ADNGSNRRAS LKRLWII

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] deduced N/A No confident structure predictions are available.
    2 View Details [113..167] PSI-BLAST 13.0 EL5 RING-H2 domain
    3 View Details [168..257] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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