YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL5_ARATH
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGNLFDSSKT LWGNMNHGSS RYSLNGKIML ASVIILFVAV ILILCFHSYA RWLFRRQNRR  60
   61 IRRRISAHLR SLAAARDPTQ SSSSLSPLDP TVLEKIPIFV YSVKTHESPL EECSVCLSEF 120
  121 EEDDEGRVLP KCGHVFHVDC IDTWFRSRSS CPLCRAPVQP AQPVTEPEPV AAVFPSVKPI 180
  181 EDTEAGSSSS SDESESSTPS SSSGSPVRFP MEACEREPID LVGIIVEIPR EFQDSNSDLP 240
  241 ADNGSNRRAS LKRLWII

Type	Start	End	Confidence
Non-Cytoplasmic	1	27	0.61
Transmembrane Helix	28	53	0.87
Cytoplasmic	54	257	0.62