YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: MCA9_ARATH

General Information:
Name(s) found: MCA9_ARATH [Swiss-Prot]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • Metacaspase-9 OS=Arabidopsis thaliana GN=AMC9 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 325 amino acids

    Gene Ontology:
    Cellular Component: apoplast [IDA]
    Biological Process: proteolysis [IEA]
    Molecular Function: cysteine-type peptidase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDQQGMVKKR LAVLVGCNYP NTRNELHGCI NDVLAMKETI LSRFGFKQDD IEVLTDEPES  60
   61 KVKPTGANIK AALRRMVDKA QAGSGDILFF HYSGHGTRIP SVKSAHPFKQ DEAIVPCDFN 120
  121 LITDVDFREL VNQLPKGTSF TMISDSCHSG GLIDKEKEQI GPSSVSSNIS PAIETTNKTI 180
  181 TSRALPFKAV LDHLSSLTGI TTSDIGTHLL ELFGRDAGLK FRLPAMDLMD LLETMTAREK 240
  241 HVDSGILMSG CQADETSADV GVGNGKAYGA FSNAIQRVLN ENEGAMKNKQ LVMMARDVLE 300
  301 RLGFHQHPCL YCSDQNADAT FLSQP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] PSI-BLAST 10.30103 Crystal structure of human caspase-1 in complex with 3-(2-mercapto-acetylamino)-4-oxo-pentanoic acid
    2 View Details [158..325] FFAS03 1.53 Crystal Structure of Caspase-1 from Spodoptera frugiperda

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.446816200197746 bayes_pls_golite062009
  • binding
    		•  0.128865592323915 bayes_pls_golite062009
  • hydrolase activity
    		•  0.00345801703057891 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle