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Protein Overview: CSE_ARATH

General Information:
Name(s) found: CSE_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|30984558|gb|AAP42742.1| At1g52760 [Arabidopsis thaliana] [NCBI NR]
  • pir||F96568 probable lipase, 20450-21648 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15450994|gb|AAK96768.1| putative lipase [Arabidopsis thaliana] [NCBI NR]
  • gi|15219082|ref|NP_175685.1| esterase/lipase/thioesterase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12324637|gb|AAG52273.1|AC019018_10 putative lipase; 20450-21648 [Arabidopsis thaliana] [NCBI NR]
  • Caffeoylshikimate esterase OS=Arabidopsis thaliana GN=CSE PE=1 SV=1 [Swiss-Prot]
  • (Q9C942) Putative lipase (At1g52760) [athaliana3702.FASTAC.txt]
  • At1g52760 [Arabidopsis thaliana]gi|15450994|gb|AAK96768.1| putative lipase [Arabidopsis thaliana]gi|25405597|pir||F96568 probable lipase, 20450-21648 [imported] - Arabidopsis thalianagi|12324637|gb|AAG52273.1| putative lipase; 20450-21648 [Arabidopsis [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Esterase/lipase/thioesterase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | esterase/lipase/thioesterase family protein | chr1:19655046-19656244 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative lipase; 20450-21648 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g52760 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • putative lipase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • catalytic/ hydrolase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: LysoPL2 | lysophospholipase 2 | chr1:19651378-19652576 FORWARD LENGTH=332 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At1g52760 OS=Arabidopsis thaliana GN=F14G24.3 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 332 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: response to oxidative stress [IMP]
    response to zinc ion [IEP]
    response to cadmium ion [IMP]
    response to hydrogen peroxide [IEP][IMP]
    Molecular Function: lysophospholipase activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSEAESSAN SAPATPPPPP NFWGTMPEEE YYTSQGVRNS KSYFETPNGK LFTQSFLPLD  60
   61 GEIKGTVYMS HGYGSDTSWM FQKICMSFSS WGYAVFAADL LGHGRSDGIR CYMGDMEKVA 120
  121 ATSLAFFKHV RCSDPYKDLP AFLFGESMGG LVTLLMYFQS EPETWTGLMF SAPLFVIPED 180
  181 MKPSKAHLFA YGLLFGLADT WAAMPDNKMV GKAIKDPEKL KIIASNPQRY TGKPRVGTMR 240
  241 ELLRKTQYVQ ENFGKVTIPV FTAHGTADGV TCPTSSKLLY EKASSADKTL KIYEGMYHSL 300
  301 IQGEPDENAE IVLKDMREWI DEKVKKYGSK TA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..332] PSI-BLAST 36.0 Epoxide hydrolase, N-terminal domain; Mammalian epoxide hydrolase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.39629727416851 bayes_pls_golite062009
  • hydrolase activity
    		•  1.02824339321154 bayes_pls_golite062009
  • lipase activity
    		•  0.849473630399459 bayes_pls_golite062009
  • carboxylesterase activity
    		•  0.424330502936163 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  0.282381128231187 bayes_pls_golite062009
  • palmitoyl-(protein) hydrolase activity
    		•  0.054530214464529 bayes_pls_golite062009
  • palmitoyl-CoA hydrolase activity
    		•  0.00303228391703936 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.60

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle