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Protein Overview: CCD4_ARATH

General Information:
Name(s) found: CCD4_ARATH [Swiss-Prot]
Description(s) found:
Found 19 descriptions.
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  • Probable carotenoid cleavage dioxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=CCD4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 595 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    plastoglobule [IDA]
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSVSSSSFL SSTFSLHHSL LRRRSSSPTL LRINSAVVEE RSPITNPSDN NDRRNKPKTL  60
   61 HNRTNHTLVS SPPKLRPEMT LATALFTTVE DVINTFIDPP SRPSVDPKHV LSDNFAPVLD 120
  121 ELPPTDCEII HGTLPLSLNG AYIRNGPNPQ FLPRGPYHLF DGDGMLHAIK IHNGKATLCS 180
  181 RYVKTYKYNV EKQTGAPVMP NVFSGFNGVT ASVARGALTA ARVLTGQYNP VNGIGLANTS 240
  241 LAFFSNRLFA LGESDLPYAV RLTESGDIET IGRYDFDGKL AMSMTAHPKT DPITGETFAF 300
  301 RYGPVPPFLT YFRFDSAGKK QRDVPIFSMT SPSFLHDFAI TKRHAIFAEI QLGMRMNMLD 360
  361 LVLEGGSPVG TDNGKTPRLG VIPKYAGDES EMKWFEVPGF NIIHAINAWD EDDGNSVVLI 420
  421 APNIMSIEHT LERMDLVHAL VEKVKIDLVT GIVRRHPISA RNLDFAVINP AFLGRCSRYV 480
  481 YAAIGDPMPK ISGVVKLDVS KGDRDDCTVA RRMYGSGCYG GEPFFVARDP GNPEAEEDDG 540
  541 YVVTYVHDEV TGESKFLVMD AKSPELEIVA AVRLPRRVPY GFHGLFVKES DLNKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..100] deduced N/A No confident structure predictions are available.
    2 View Details [101..595] PSI-BLAST 117.0 Crystal structure of apocarotenoid cleavage oxygenase from Synechocystis, native enzyme


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.59

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle