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Protein Overview: gi|110736326, gi...

General Information:
Name(s) found: gi|8809667 [NCBI NR]
gi|32441262 [NCBI NR]
gi|15237960 [NCBI NR]
gi|110736326 [NCBI NR]
Description(s) found:
Found 15 descriptions.
SHOW ALL
  • gi|8809667|dbj|BAA97218.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|32441262|gb|AAP81806.1| At5g46840 [Arabidopsis thaliana] [NCBI NR]
  • gi|15237960|ref|NP_199496.1| RNA recognition motif (RRM)-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110736326|dbj|BAF00133.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 501 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: nucleotide binding [IEA]
    nucleic acid binding [IEA][ISS]
    RNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGKKKSKVTE PESQNDESQT IFSTLFSGEV ESSGFASLFS ADNPFRRKQP QEIKESSIPD  60
   61 EKKGDKRNAE NEEEEEETDL PVKTKKSKKE KKLTDSGDEK ETISEAVEES GLVSKRKKRK 120
  121 RDEIENEYET KKYGSVEMKE KKVGEKRKKA DEVADTMVSK EGFDDESKLL RTVFVGNLPL 180
  181 KVKKKVILKE FSKFGEVESV RIRSVPIVDS KRTRKGAIML KQINEKASSV HAYVVFETEQ 240
  241 SAAASLAHNM SLIDGNHVRV DRACPPRKKQ KGHDDTHLYD PKRTVFMGNL PFDVKDEEVY 300
  301 QLFTGKSNLE NSIEAVRVIR DPHLNIGKGI AYVLFKTREA ANLVLKKGYL KLRERELRIS 360
  361 RVKPDTPSKR KSNPSEAYSP AQKRLQKDKV VTPTPTGKAN LSYQGVRASK SGDDKKTPYQ 420
  421 KSSAQTKMRP RGSSSNDNKK SGNNSASKER SQKRPAVAAR KAKANAKGSK ESGGKRFAGT 480
  481 KRKQENRTPE SFSKKKKTKR F

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..376] PSI-BLAST 23.09691 No description for 2ghpA was found.
    2 View Details [377..501] PSI-BLAST 14.39794 No description for 2g4bA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle