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Protein Overview: FBL12_ARATH

General Information:
Name(s) found: FBL12_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • F-box/LRR-repeat protein 12 OS=Arabidopsis thaliana GN=FBL12 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 395 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: ubiquitin-dependent protein catabolic process [TAS]
    Molecular Function: ubiquitin-protein ligase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEDVSESDNN VETSIIHLPD DCLSFIFQRL DSVADHDSFG LTCHRWLNIQ NISRRSLQFQ  60
   61 CSFSVLNPSS LSQTNPDVSS HHLHRLLTRF QWLEHLSLSG CTVLNDSSLD SLRYPGARLH 120
  121 TLYLDCCFGI SDDGISTIAS FCPNLSVVSL YRCNISDIGL ETLARASLSL KCVNLSYCPL 180
  181 VSDFGIKALS QACLQLESVK ISNCKSITGV GFSGCSPTLG YVDADSCQLE PKGITGIISG 240
  241 GGIEFLNISG VSCYIRKDGL VPIGSGIASK LRILNLRMCR TVGDESIEAI AKGCPLLQEW 300
  301 NLALCHEVKI SGWEAVGKWC RNLKKLHVNR CRNLCDQGLL ALRCGCMNLQ ILYMNGNARL 360
  361 TPTAIEMFRL HRADITLRTE EMMVIGPDWR LYAQE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..395] PSI-BLAST 16.0 Ribonuclease inhibitor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ubiquitin-protein ligase activity
    		•  7.44972411254615 bayes_pls_golite062009
  • small conjugating protein ligase activity
    		•  7.15534507891224 bayes_pls_golite062009
  • acid-amino acid ligase activity
    		•  6.28297720668265 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  5.29850707355885 bayes_pls_golite062009
  • ligase activity
    		•  1.96305455500679 bayes_pls_golite062009
  • protein binding
    		•  1.74797200095236 bayes_pls_golite062009
  • binding
    		•  1.43286145836735 bayes_pls_golite062009
  • catalytic activity
    		•  0.143741655309638 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle