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Protein Overview: gi|10176895, gi|...

General Information:
Name(s) found: gi|18176302 [NCBI NR]
gi|15241494 [NCBI NR]
gi|10176895 [NCBI NR]
Description(s) found:
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  • gi|18176302|gb|AAL60019.1| putative berberine bridge enzyme [Arabidopsis thaliana] [NCBI NR]
  • gi|15241494|ref|NP_199253.1| FAD-binding domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10176895|dbj|BAB10125.1| berberine bridge enzyme [Arabidopsis thaliana] [NCBI NR]
  • (Q9FKU8) Berberine bridge enzyme [athaliana3702.FASTAC.txt]
  • putative berberine bridge enzyme [Arabidopsis thaliana]gi|15241494|ref|NP_199253.1| FAD-binding domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 FAD-binding domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | FAD-binding domain-containing protein | chr5:17903592-17905298 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative berberine bridge enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • electron carrier [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • berberine bridge enzyme [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | FAD-binding Berberine family protein | chr5:17886365-17888071 REVERSE LENGTH=537 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Berberine bridge enzyme OS=Arabidopsis thaliana GN=At5g44400 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    Biological Process: NONE FOUND
    Molecular Function: oxidoreductase activity [IEA]
    FAD binding [IEA]
    catalytic activity [IEA]
    electron carrier activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGISKPLPLF SILVLYFSLY TITPTSSLAS LQDQFINCVQ RNTHVYFPLE KTFFAPTKNV  60
   61 SMFSQVLEST AQNLRFLKKS MPKPGFIFSP IHESHVQASI ICSKKLRMHL RVRSGGHDYE 120
  121 GLSYVSQIDK PFILMDLSKM RQVNINIQDN SAWVQSGATV GELYYRIAEK SKVHGFPAGL 180
  181 CSSLGIGGHI TGGAYGSMMR KYGLGADNVL DAKIVDANGK LLDRAAMGED TFWAIRGGAG 240
  241 GSFGIILAWK IKLVPVPKTV TVFTVTKTLQ QDVGNKIISK WQRVADKLVE ELFIRVLFNV 300
  301 AGTGGNKTVT TSYNALFLGG KGTLMNVMKK SFPELGLTFK DCIEMSWLES IAYISGFPTH 360
  361 TPTNVLLQGK SPFPKVSFKA KSDFVKTPIP ESGLQGIFKK LLKEDIPLMI WNPYGGMMAK 420
  421 IPESQIPFPH RKGVLFKVQY VTSWLDSDKR PSRHINWIRD LYSYMTPYVS SNPREAYVNY 480
  481 RDLDLGRNTK DVKTCIKQAQ VWGANYFKNN FNRLMMIKAK VDPENFFRHE QSIPPMM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..537] PSI-BLAST 52.39794 Crystal structure of 6-hydoxy-D-nicotine oxidase from Arthrobacter nicotinovorans. Crystal Form 3 (P21)


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle