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Protein Overview: gi|15218016, gi|...

General Information:
Name(s) found: gi|15218016 [NCBI NR]
gi|14475936 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15218016|ref|NP_176158.1| transcription factor-related [Arabidopsis thaliana] [NCBI NR]
  • gi|14475936|gb|AAK62783.1|AC027036_4 hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 1729 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDSIISTALD EICSQGNTGI PLVTLWSRLS PLSSSIKTHV WRNLLTIPQL QFKTKKNTVY  60
   61 GSSDTSIQNL DDALRLDLRI VANENLRANF VGLYDTQSNN TTIPAIQRRV LERLAIARDN 120
  121 GDAQNLLAKE FGIDGRNFFY SVKQLESRGL IVRQPAIVRT KEVDSKTTSC ITTNMIYLTR 180
  181 YAKPMGSQQR FEICKEDSVS EHETTAAGED TLINDFLPAM QEVCDKLEKA NDKVLVISDI 240
  241 KQDLGYTGSD IRHRAWRSVC RRLIDSHVVE EFDAMVNNKV ERCLRLLKRF SAEDFNYSRK 300
  301 KQLIKFGRSV QKTEQTLELS IDNQIYDMVD AQGSKGLAVM ELCERLGIDK KKIYARLCSI 360
  361 CSRVGMHLQA ESHKKTRVFR LWTSRHARSK SSDKFPDKAE NIRGEDNDSS TPHGTDGLAK 420
  421 TKTTMEHSTA ISDADFSTTP ASVTDSERNS GAKRRKVPTR RNLQESFNEI GEKVVNAAKG 480
  481 SPDLPKSAKS KVQQPHATIE NSRREHRILE RLKEEKFVLR VEFHKWLLTF EKDRSPKVDR 540
  541 KTIYRILDRR QDKGLCKCVG IRVPNVNDCD RSRCSVIVLH PSVQRLTRDI GNEIHDRIRS 600
  601 FELGFRSQRS SKRESDKTVP VLNDVQRAIR ASKSGAMRAK GVVLAKMFRV KLLHCFLWDY 660
  661 FSSLPGWDSA SSSIHHHISK NLFSLKDAFR AMPLQLFLQV VGSTQKADDI MKKYKQVMRL 720
  721 SELPSEEYKL LMDTRVIGIL SMLINILRRL KLIQMVSDRL RRDKIEKYAN LTHAMELKPY 780
  781 IEEPVFVAAK FDVTSLDFRP RIRHDFILSN RDAVDEYWLT LEYCYAASDH EAAKQAFPGS 840
  841 VSQEVFGVRS WASDHVMTAE QRAKLLQCID EKAKLSFKEC EKFAKDLNLT IEQVMHVYHA 900
  901 KHGRRVKSNS KDKNKAVENS PSSSKKRKRA SLVKTKGEGV KSIIVDGQKV LNSDAIDASN 960
  961 SESFQDSLQD DQTPIQMHRQ EHAEISNLTE DEPQCSNIIN RHASSKTRSL PSQRFTWTDE1020
 1021 ADRKLLSKYA RHRAALGAKF HGVNWASVQE LPAPPLPCKR RIQTMMRNDK VRKAVMRLCN1080
 1081 LLSERYAKHL KTESDSVEHR KDEGKWDDFN EKSISQAFNN VLELKKMGKL MPSQRTRPEI1140
 1141 HTEDIQTVSI DQVKDTSRLH QIFKHVDEKD NGCIQVQESL VVSTAVELLK LVFLSMPTAP1200
 1201 SMPNLLEDTL RRYSEGDLFT AYSYLRDKKF LVGGSDGQPF VLSQNFLHSI SKSPFPVNTG1260
 1261 KRAAKFSSWL VEHERELMDE GVTLTSDLQC GDVLNFFSLV ASGELSLSVS LPEEGVGEPE1320
 1321 HRRGLKRRAE DVEESELDSA KKFKLLGEGE INVRKEKGFP GLAVSVHRVT IPIANAIELF1380
 1381 KDDDSWSGEL HFMSGETNNG CGSDDMKELL DSKDATVIPG SLVDSPWQAM ASVASCIMSG1440
 1441 SAEEQQSLIS PEVFEAVSNA LHKAGDQGLS IEEVHFLINI PSQETCDCIV EVLQTFGVAL1500
 1501 KVNGYDNFRL VHSLYRSKYF LTLADGGTTQ NGQQSQPANY VEKALEEHRS NDVVTSDYST1560
 1561 SKDKQVHVSE NSVHKVTILN IPEMAETSGL QEESTKAPSV TFGTSIEGET KESTSVKSQP1620
 1621 IFPWINADGS VNKVVFDGLV RRVLGTVMQN PGIPEEEIIN QMDVLNPQSC RKLLELMTLD1680
 1681 GYMKVREMVQ TKFSGPPSLL TGLLFTGHRK TELISRKHFF ANSKGLFAL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..188] MSA 1.048974 View MSA. No confident structure predictions are available.
    2 View Details [189..444] deduced N/A No confident structure predictions are available.
    3 View Details [445..663] deduced N/A No confident structure predictions are available.
    4 View Details [664..835] MSA 1.029964 View MSA. No confident structure predictions are available.
    5 View Details [836..1052] deduced N/A No confident structure predictions are available.
    6 View Details [1053..1132] deduced N/A No confident structure predictions are available.
    7 View Details [1133..1392] MSA 1.02198 View MSA. No confident structure predictions are available.
    8 View Details [1393..1610] MSA 1.024995 View MSA. No confident structure predictions are available.
    9 View Details [1611..1729] MSA 1.022966 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle