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Protein Overview: gi|25406102, gi|...

General Information:
Name(s) found: gi|25406102 [NCBI NR]
gi|19310751 [NCBI NR]
gi|18409758 [NCBI NR]
gi|15028381 [NCBI NR]
gi|12323438 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • pir||D96735 hypothetical protein F23N20.8 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|19310751|gb|AAL85106.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18409758|ref|NP_565011.1| auxin efflux carrier family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15028381|gb|AAK76667.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|12323438|gb|AAG51701.1|AC016972_20 hypothetical protein; 37307-38680 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: integral to membrane [IEA]
    Biological Process: auxin polar transport [ISS]
    Molecular Function: auxin:hydrogen symporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF  60
   61 LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY LVVLICRPPP EFNRFTIVMT 120
  121 AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE 180
  181 YYEVVEEEGV EIEEINVENH DASRPLLVEA EWPGIEDKET EHCKTPFIAR VFNSISSFSQ 240
  241 TSFPEVDLGG EYGGESSSPR SIQCLAEPRV MRRIRVVAEQ TPVKHILQPP TIASLLAIII 300
  301 GSVPQLKSVV FGYDAPLSFI TDSLNIMGSA MVPSVMLVLG GMLSEGPNES TLGLRTTIGI 360
  361 SVARLLVLPL VGIGIVMSAD KLGLISSADP MFKFVLLLQY STPSAILLGA IASLRGYAVR 420
  421 EASALLFWQH IFALLSLTFY IVIFFKLTVE TTVQGMQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..185] Pfam 5.853872 No description for PF03547.9 was found. No confident structure predictions are available.
    2 View Details [186..256] FFAS03 1.37 30S subunit
    3 View Details [257..457] Pfam 7.823909 No description for PF03547.9 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle