| Protein: | gi|25406102, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 457 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|25406102, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
217.0 | [0..10] | [448..1] |
|
Region A: Residues: [1-185] |
1 11 21 31 41 51
| | | | | |
1 MSGFSSGNVN SRVVDILSGV VPLLKLICLT VIGLLLAHPK TQLVPRATFR LLSKLVFALF 60
61 LPCLIFTELG ESITLDNIVQ WWFIPVNVLL SAVVGSLIGY LVVLICRPPP EFNRFTIVMT 120
121 AFGNTGNLLL AIVSSVCHTK TNPFGPNCNS RGVSYVSFAQ WVAVILVYTV VYHMMEPPLE 180
181 YYEVV
|
| Detection Method: |  |
| Confidence: | 5.853872 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [186-256] |
1 11 21 31 41 51
| | | | | |
1 EEEGVEIEEI NVENHDASRP LLVEAEWPGI EDKETEHCKT PFIARVFNSI SSFSQTSFPE 60
61 VDLGGEYGGE S
|
| Detection Method: | |
| Confidence: | 1.37 |
| Match: | 1qd7B |
| Description: | 30S subunit |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [257-457] |
1 11 21 31 41 51
| | | | | |
1 SSPRSIQCLA EPRVMRRIRV VAEQTPVKHI LQPPTIASLL AIIIGSVPQL KSVVFGYDAP 60
61 LSFITDSLNI MGSAMVPSVM LVLGGMLSEG PNESTLGLRT TIGISVARLL VLPLVGIGIV 120
121 MSADKLGLIS SADPMFKFVL LLQYSTPSAI LLGAIASLRG YAVREASALL FWQHIFALLS 180
181 LTFYIVIFFK LTVETTVQGM Q
|
| Detection Method: | |
| Confidence: | 7.823909 |
| Match: | PF03547.9 |
| Description: | No description for PF03547.9 was found. |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
