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Protein Overview: gi|11357940, gi|...

General Information:
Name(s) found: gi|9755774 [NCBI NR]
gi|15237972 [NCBI NR]
gi|11357940 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|9755774|emb|CAC01894.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237972|ref|NP_197252.1| glycosyl hydrolase family 5 protein / cellulase family protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T51476 hypothetical protein K3M16_70 - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 526 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: carbohydrate metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cation binding [IEA]
    hydrolase activity, hydrolyzing O-glycosyl compounds [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKAIALTVF LFLFLSLISL TLATDYPLFT KSRWIVNNKG HRVKLACANW PSHLKPVVAE  60
   61 GLSSQPMDSI SKKIKDMGFN CVRLTWPLEL MINDTLAFNV TVKQSFERYG LDHELQGIYT 120
  121 HNPYIVNTPL INVFQAVVYS LGRHDVMVIL DNHKTVPGWC CSNDDPDAFF GDPKFNPDLW 180
  181 MLGLKKMATI FMNVKNVVGM SLRNELRGYN HTSKDWYKYM QKGAEAVHTS NPNVLVILSG 240
  241 LNFDADLSFL KDRPVNLSFK KKLVLELHWY SFTDGTGQWK SHNVNDFCSQ MFSKERRTGG 300
  301 FVLDQGFPLF LSEFGTDQRG GDLEGNRYMN CMLAWAAEKD LDWAVWAVTG VYYFREGKRG 360
  361 VVEAYGMLDA NWHNVHNYTY LRRLSVIQPP HTGPGVKHNH HKKIFHPLTG LCLVRKSHCH 420
  421 ESELTLGPCT KDEPWSYSHG GILEIRRGHK SCLEGETAVG KSVKLGRICT KIEQISATKM 480
  481 HLSFNTSDGS LVCLDVDSDN NVVANSCNCL TGDTTCEPAS QWFKIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..394] PSI-BLAST 38.30103 Endocellulase E1
    2 View Details [395..526] FFAS03 1.35 Plant cytotoxin B-chain (lectin)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.32563207632796 bayes_pls_golite062009
  • hydrolase activity
    		•  0.85514037342026 bayes_pls_golite062009
  • hydrolase activity, acting on glycosyl bonds
    		•  0.80912338090552 bayes_pls_golite062009
  • hydrolase activity, hydrolyzing O-glycosyl compounds
    		•  0.41375210927547 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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