YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|20197178, gi|...

General Information:
Name(s) found: gi|42570317 [NCBI NR]
gi|20197178 [NCBI NR]
Description(s) found:
Found 11 descriptions.
SHOW ALL
  • gi|42570317|ref|NP_850075.2| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|20197178|gb|AAC14529.2| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 565 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSGLKIIEE PQKPIEKLQI YPTANAGVSP FWRDKYERDA KKYWDIFYKH HGDRFFKDRH  60
   61 YLDKEWNSYF SVSGKSVILE VGCGAGNTIF PLIATYPDIF VYACDFSPRA VELVKAHDEY 120
  121 TETRVCAFAC DLTGDGLDKH ISPSSVDIVT MIFVLSAVSP EKMSSVLQNI RKVLKPNGCI 180
  181 LFRDYAVGDL AQERFSGKDQ RISENFYVRG DGTRAFYFSN EFLETLFSEQ GFEVEELDVC 240
  241 CKQVENRSRE LVMNRRWVQA TFRRTNGNKN PCDSLTPAKL DKSEQQDSIQ SKSEEQERKE 300
  301 IIDYTDIDIS DGLAMEMFGA SPSSHEMSVV KLRDSAFKIK LLSKEYQHTC KSTGLMLWES 360
  361 ARLMASVLDR NPNIVSGKRV LELGCGCTGI CSMVAARSAN LVVATDADTK ALTLLTENIT 420
  421 MNLQSSLLGK LKTSVLEWGN KEHIESIKRL ACEGFEVIMG TDVTYVAEAI IPLFETAKEL 480
  481 ILRKMGDDLE VQEKPALILC HVFRRVDEPS LLSAASKFGF KLADRWAANS KESPIGNIID 540
  541 SWFSEKDLVA EIPSSALHIL YFQME

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..313] PSI-BLAST 18.045757 Crystal structure of Hma (MmaA4) from Mycobacterium tuberculosis, apo-form
    2 View Details [314..565] PSI-BLAST 36.0 Structure of the Predominant protein arginine methyltransferase PRMT1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity
    		•  1.55708326065545 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  0.90417202530863 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  0.89763572661057 bayes_pls_golite062009
  • binding
    		•  0.777596419415505 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.352072576393216 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.349480046648587 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  0.34836765632152 bayes_pls_golite062009
  • DNA binding
    		•  0.07821658818758 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.073128297647348 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transferase activity
    		•  1.55708326065545 bayes_pls_golite062009
  • protein methyltransferase activity
    		•  0.90417202530863 bayes_pls_golite062009
  • N-methyltransferase activity
    		•  0.89763572661057 bayes_pls_golite062009
  • binding
    		•  0.777596419415505 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.352072576393216 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.349480046648587 bayes_pls_golite062009
  • histone methyltransferase activity
    		•  0.34836765632152 bayes_pls_golite062009
  • DNA binding
    		•  0.07821658818758 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.073128297647348 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle