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Protein Overview: gi|10801371, gi|...

General Information:
Name(s) found: gi|25403146 [NCBI NR]
gi|15222574 [NCBI NR]
gi|10801371 [NCBI NR]
Description(s) found:
Found 6 descriptions.
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  • pir||F86445 unknown protein [imported] - Arabidopsis thaliana [NCBI NR]
  • ref|NP_174492.1| IWS1 C-terminus family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10801371|gb|AAG23443.1|AC084165_9 unknown protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 404 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: regulation of RNA elongation [TAS]
    brassinosteroid mediated signaling pathway [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGGRGGGSTD YDDKVGRKRK KEKERSSSGS GKEKRHKFPN RGERKSEEID EMWKSIAHNP  60
   61 ENDEEGVRTM DDDNFIDDTG LDPSERYGGD AGDRSPTHYP QAEEGEDEDE VNNLFKMGKK 120
  121 KKKTERNPAE IALLVENVMA ELEVTAEEDA ELNRQGKPAI NKLKKLSLLT DVLGKKQLQT 180
  181 EFLDHGVLTL LKNWLEPLPD GSLPNINIRA AILRVLTDFP IDLDQYDRRE QLKKSGLGKV 240
  241 IMFLSKSDEE TNSNRRLAKD LVDKWSRPIF NKSTRFEDMR NLDEDRVPYR RPPVKKPSNK 300
  301 ATMESRDGDF DLEIRERKTG LTSGQSSRGD RQMTMRPEAT PLDFLIRPQS KIDPDEIIAR 360
  361 AKQVSQDQRR VKMNKKLQQL KGTKKKRLQA TKVSVEGRGM IKYL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..162] MSA 19.068997 View MSA. No confident structure predictions are available.
    2 View Details [163..272] FFAS03 1.14 Transcription elongation factor TFIIS N-domain
    3 View Details [273..404] MSA 1.04598 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle