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Protein Overview: gi|25370588, gi|...

General Information:
Name(s) found: gi|61742675 [NCBI NR]
gi|25370588 [NCBI NR]
gi|20198075 [NCBI NR]
gi|15227974 [NCBI NR]
Description(s) found:
Found 14 descriptions.
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  • gi|61742675|gb|AAX55158.1| hypothetical protein At2g42650 [Arabidopsis thaliana] [NCBI NR]
  • pir||E84856 hypothetical protein At2g42650 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|20198075|gb|AAM15385.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15227974|ref|NP_181793.1| 60S ribosomal protein-related [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 372 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: RNA processing [IEA]
    Molecular Function: RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRVSPKTVD DAVKALVKEG NEKSRTEKPQ LLEEDGFFYL VVALKKIPQR NFTNAYRIPL  60
   61 PHPLINTTED SPELCLIIDD RPESGLTEED AKKNIKSENI PITKVVKLSK LKSDYGSFES 120
  121 KRKLCDSYDM FFSDRRVIPM LPKLIGKKFF QSKKTPVAID LKHMNWKEQI EKACGAAMFF 180
  181 MRTGSCSAIK VAKLSMESDD IVENVTATLN GVVDVLPSRW KYIRSLHLKL SESLSLPLYQ 240
  241 TVPYLQLKID PLGVEEVKNG EGLAKSDVDD SSSKSVKTKK KNGKIHEVRY MDSNVSETLG 300
  301 DDEFDRSVGE DEVADDLNAS GDKKKRKKMS SSKSAVSGKP DIVKSKNGQK SKKLKKDIDE 360
  361 SGGGFKAKTK RR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..243] PSI-BLAST 46.0 70S ribosome functional complex
    2 View Details [244..372] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural molecule activity
    		•  0.64242019867621 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.633181483943 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle