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Protein Overview: RH43_ARATH

General Information:
Name(s) found: RH43_ARATH [Swiss-Prot]
Description(s) found:
Found 14 descriptions.
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  • Putative DEAD-box ATP-dependent RNA helicase 43 OS=Arabidopsis thaliana GN=RH43 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 542 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: NONE FOUND
    Molecular Function: nucleic acid binding [IEA][ISS]
    ATP binding [IEA]
    zinc ion binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVDDGYVEY VPVEERLAQM KRKVVEEPGK GMMEHLSDKK KLMSVGELAR GITYTEPLST  60
   61 WWKPPLHVRK MSTKQMDLIR KQWHITVNGE DIPPPIKNFM DMKFPSPLLR MLKDKGIMHP 120
  121 TPIQVQGLPV VLSGRDMIGI AFTGSGKTLV FVLPMIILAL QEEIMMPIAA GEGPIALVIC 180
  181 PSRELAKQTY DVVEQFVASL VEDGYPRLRS LLCIGGVDMR SQLDVVKKGV HIVVATPGRL 240
  241 KDILAKKKMS LDACRLLTLD EADRLVDLGF EDDIRHVFDH FKSQRQTLLF SATMPAKIQI 300
  301 FATSALVKPV TVNVGRAGAA NLDVIQEVEY VKQEAKIVYL LECLQKTTPP VLIFCENKAD 360
  361 VDDIHEYLLL KGVEAVAIHG GKDQEDRDYA ISLFKAGKKD VLVATDVASK GLDFPDIQHV 420
  421 INYDMPGEIE NYVHRIGRTG RCGKTGIATT FINKNQSEIT LLDLKHLLQE AKQRIPPVLA 480
  481 ELNGPMEETE TIANASGVKG CAYCGGLGHR ILQCPKFEHQ KSVAISSSRK DHFGSDGYRG 540
  541 EV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..475] PSI-BLAST 99.0 No description for 2db3A was found.
    2 View Details [476..542] PSI-BLAST 18.522879 No description for 2v8oA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.78

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle