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Protein Overview: gi|11357725, gi|...

General Information:
Name(s) found: gi|9755657 [NCBI NR]
gi|15242161 [NCBI NR]
gi|11357725 [NCBI NR]
Description(s) found:
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  • gi|9755657|emb|CAC01809.1| putative protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15242161|ref|NP_196994.1| helicase associated (HA2) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T51435 hypothetical protein F2G14_20 - Arabidopsis thaliana [NCBI NR]
  • (Q9LFR5) Hypothetical protein [athaliana3702.FASTAC.txt]
  • putative protein [Arabidopsis thaliana]gi|11357725|pir||T51435 hypothetical protein F2G14_20 - Arabidopsis thalianagi|15242161|ref|NP_196994.1| helicase associated (HA2) domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Helicase associated (HA2) domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | helicase associated (HA2) domain-containing protein | chr5:4822679-4823584 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • putative protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • helicase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | helicase associated (HA2) domain-containing protein | chr5:4822676-4823581 REVERSE LENGTH=301 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Helicase associated (HA2) domain-containing protein OS=Arabidopsis thaliana GN=F2G14_20 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 301 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNLANTVLT LKGLSVKNLV RFDLIDSPAP DTLARALDDL YHLGALDDDC NLTKTGEMMS  60
   61 EFPLDPQMAK MLIVSPQFNC SNEILSISAM LSVPNCFIRP RGEAQKAADE AKSSFAHIDG 120
  121 DHLTLLNLFH AFLQNNQDPN WCCTKFINYR AMKSAVSVRE QLVRIMLRFQ IKLCSPDFNS 180
  181 RDYYVNIRKA LLAGYFMQVA HLERTGHYLT FRDKDDQVVH LHPSNCLDHK PEWVVYNEYV 240
  241 FTSRNFIRTV THIRGEWLVD VAPHYYKLAN FPSSEAKRVL ERHYKKRKLS EERSCKLYSN 300
  301 S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] FFAS03 1.36 No description for 2v8oA was found.
    2 View Details [173..301] Pfam 25.886057 No description for PF07717.7 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle