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Protein Overview: gi|20198060, gi|...

General Information:
Name(s) found: gi|20198060 [NCBI NR]
gi|18400804 [NCBI NR]
Description(s) found:
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  • gi|20198060|gb|AAM15376.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18400804|ref|NP_565591.1| phox (PX) domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • (Q8S8D3) Hypothetical protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|18400804|ref|NP_565591.1| phox (PX) domain-containing protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Phox (PX) domain-containing protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | phox (PX) domain-containing protein | chr2:10804678-10807835 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Phox (PX) domain-containing protein | chr2:10797599-10800756 FORWARD LENGTH=643 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Phox (PX) domain-containing protein OS=Arabidopsis thaliana GN=At2g25350 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 643 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: intracellular signaling pathway [ISS]
    signal transduction [ISS]
    Molecular Function: phosphoinositide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQRRSPPKHR HDGASPLPLG MDWSPPPRNW NGRDTIWPHD FRTGWSYCVT IPSWTLLSKS  60
   61 KNSDPIVFYR VQVSVQSPEG VSTMRGILRR FNDFVKLLAD LKRAFPRKSF PSAPPKGFLR 120
  121 VKSRDMLEER RCSLEDWMTK LLSDIELARS VVVASFLELE ATARSACQVV DQNASDSNDD 180
  181 GNSTSLSSLV HPNSGGSSLL SSDYGSDTAY ETSELGSASL GQDDVSETDT GDLTLDEDLT 240
  241 NPTEKLVKFS MSNIDEGLSM SQTIIEQLED FPKHRVHLGY ANDITETNSY NGKASKGVFR 300
  301 ANNDLRCRSE SETSHSVMHD RKLSLESADG VSLLAGETST SSILSSIVHS QLDVNHDISV 360
  361 GNLEIPGNGR IVLPLKMHSK LNRILLTMNE RLLNSKTDME DLIARLNQET AVKEYLNRKV 420
  421 DDLEVELETT KQRNKENLEQ ALMTERQSVT KMQWDMEELR QKTFEMELKL KSKEDGSSDS 480
  481 KTSGNSTISE SHELLQEMDA TKQQLEDLSR RYVELEAKSK ADIKVLVREV KSLRRSHMEM 540
  541 EKELTRSLTE KSDTEKLLQQ ERIIVENTLE ARRRLYSDCE ILHDRLKVNN TNLSMDESSN 600
  601 NREDLSEVSN ALQDQIEAQL LLGFDETASE DELRKIMADM YED

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..396] PSI-BLAST 20.09691 Heavy meromyosin subfragment
    2 View Details [397..643] PSI-BLAST 8.522879 Tropomyosin


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle